Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05139 and BPUM_1803
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence pep-align/BSNT_05139___yvbT.1.24716.seq
# -bsequence pep-align/BPUM_1803___yvbT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05139___yvbT-BPUM_1803___yvbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05139___yvbT-BPUM_1803___yvbT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05139___yvbT
# 2: BPUM_1803___yvbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 254/344 (73.8%)
# Similarity: 296/344 (86.0%)
# Gaps: 8/344 ( 2.3%)
# Score: 1359.0
#
#
#=======================================
BSNT_05139___ 1 -----MSNNQRKDTLLSVLNLSPVVQGGTIAESFRNSMDLARRAEEWGYH 45
||.:..|.|..||||||.|.:||||.|||.:||:||::||:||||
BPUM_1803___y 1 MGTSFMSQSVLKRTAYSVLNLSSVTEGGTIKESFEHSMNLAKKAEKWGYH 50
BSNT_05139___ 46 RYWLAEHHNIEGVASSATAVLIGHIAGGTKKIRVGSGGIMLPNHSSLVIA 95
|||||||||:||||||||:||||:|||||:||||||||||||||||||||
BPUM_1803___y 51 RYWLAEHHNMEGVASSATSVLIGYIAGGTEKIRVGSGGIMLPNHSSLVIA 100
BSNT_05139___ 96 EQFGTLETLYPGRIDLGLGRAPGTDQLTARALRRNINSGEDFPEQLEELR 145
|||||||||||||||||||||||||||||||||||:::||||||||||||
BPUM_1803___y 101 EQFGTLETLYPGRIDLGLGRAPGTDQLTARALRRNLHNGEDFPEQLEELR 150
BSNT_05139___ 146 NYFKPSGNVRNQVRAIPGEGIDVPIWLLGSSGFSARLAGELGLPFAFAAH 195
.||||:|.|:..|||:||||:|:|||||||||||||||||||||||||||
BPUM_1803___y 151 QYFKPTGQVKKHVRAVPGEGLDIPIWLLGSSGFSARLAGELGLPFAFAAH 200
BSNT_05139___ 196 FSPANTVPALELYRNSFTPSDVLDEPYAMVGVTIIAADTNEKAQHLATSH 245
|||.||:|||||||.||..||||.|||||||||..|||..|:|::|||||
BPUM_1803___y 201 FSPKNTIPALELYRQSFRTSDVLKEPYAMVGVTAFAADQTERAEYLATSH 250
BSNT_05139___ 246 YQRFLDLVRGTPNQLKPPVEDMDQIWSPYEKAMVNEQLSSTIVGGPEEVK 295
|||||.|:|.||.:||.||:.||.:|||||||||:||||||::|..|:||
BPUM_1803___y 251 YQRFLSLIRNTPGKLKAPVDSMDGLWSPYEKAMVDEQLSSTMIGDKEKVK 300
BSNT_05139___ 296 AKLEDFVKTTQADEIMVNSETFEHADRMRSFEIIADVWNNR--- 336
.:||.||:.|||||:|:||:.|:|.:||||:|||.:::...
BPUM_1803___y 301 RELEAFVEATQADEVMINSDMFDHQERMRSYEIIGEIFQEAQEK 344
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