Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01008 and BPUM_2117

See DNA alignment / Visit BSNT_01008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01008___ydhQ.1.24716.seq
#    -bsequence pep-align/BPUM_2117___ydhQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01008___ydhQ-BPUM_2117___ydhQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01008___ydhQ-BPUM_2117___ydhQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01008___ydhQ
# 2: BPUM_2117___ydhQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     142/240 (59.2%)
# Similarity:   183/240 (76.2%)
# Gaps:           3/240 ( 1.2%)
# Score: 751.0
# 
#
#=======================================

BSNT_01008___      1 MNKYEIIANEMRNRIKNNVYPIDQPIPDEVSLAKEFNSSRMTMKRALDNL     50
                     |.|||:|:.|:|.||....||.|||||||.|||.||..||||||||||.|
BPUM_2117___y      1 MKKYELISEEIRKRIGTAYYPEDQPIPDENSLAAEFQCSRMTMKRALDLL     50

BSNT_01008___     51 VAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNLLKDKKIQSKVI    100
                     ||||||||||||||||:::|:....::|..:|..|.|.::.||.:.:::|
BPUM_2117___y     51 VAEGLLFRKRGHGTFIVKAALNQGAINVSGHENKGFTKVMADKNVTTQII    100

BSNT_01008___    101 QFKVQFPTEEVAAHLSIDQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIP    150
                     .|.|.||::|||||||||..||:|.::|||:|:.||||||||:||.:||.
BPUM_2117___y    101 HFDVHFPSKEVAAHLSIDPTTPIYDIIRLRLVDEEPYVLEKTFMPVNLIK    150

BSNT_01008___    151 GINDDVLHDSIYNHITNVLQLKIAGTHRKIRACKSDHIDQQHLGCKQDDP    200
                     ||:::||..|||.:|:|.|.||:||.|:||||.|||.:|||:|||...||
BPUM_2117___y    151 GIDEEVLLGSIYGYISNDLNLKVAGAHKKIRAAKSDELDQQYLGCDPTDP    200

BSNT_01008___    201 ILEVEHVGFLDTGIPFEYSFSRHRHDKFVVTSVNIRR---    237
                     :||||.|.:|:||.|||||||.||:|||..::|.|.:   
BPUM_2117___y    201 VLEVEQVAYLNTGRPFEYSFSHHRYDKFDFSTVEITKTGR    240


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