Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03553 and BPUM_2128

See DNA alignment / Visit BSNT_03553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03553___yqjG.1.24716.seq
#    -bsequence pep-align/BPUM_2128___oxaA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03553___yqjG-BPUM_2128___oxaA2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03553___yqjG-BPUM_2128___oxaA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03553___yqjG
# 2: BPUM_2128___oxaA2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     158/279 (56.6%)
# Similarity:   204/279 (73.1%)
# Gaps:          11/279 ( 3.9%)
# Score: 824.0
# 
#
#=======================================

BSNT_03553___      1 MLKTYQKLLAMGIFLIVLCSGNAAFAATNQVGGLSNVGFFHDYLIEPFSA     50
                         .::||.:...|.::...:.||||:.|....|: ||||.|.::|||.
BPUM_2128___o      1 ----MKRLLTICTTLCLMMIASPAFAASGQTNASSD-GFFHHYFVQPFSE     45

BSNT_03553___     51 LLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIK    100
                     |:..:|..||.:|||||:.||:|||:::.|||.|||||||:.|||||::|
BPUM_2128___o     46 LIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVK     95

BSNT_03553___    101 PQVDSIQVKLKKTKDPEKQKELQMEMMKLYQENNINPLAMGCLPMLIQSP    150
                     ||:|.||.||||||:|||||||||||||:|:|||:|||||||||||||.|
BPUM_2128___o     96 PQIDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIP    145

BSNT_03553___    151 IMIGLYYAIRSTPEIASHSFLWFSLGQSDILMSLSAGIMYFVQAYIAQKL    200
                     |::|.|.|||||||||:||||||:|||:|:|:::.||.|||:|.|:.|:.
BPUM_2128___o    146 IVLGFYSAIRSTPEIATHSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRF    195

BSNT_03553___    201 SAKYSAVPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFL    250
                      ||.|.. |..||.:.||:|..|||:||...|:|.||||||||.||||.|
BPUM_2128___o    196 -AKQSGT-QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLL    243

BSNT_03553___    251 TVQNIVLQMTHHKSKKTAALTESVK----    275
                     |||.|:|.:.:.|||..|...:...    
BPUM_2128___o    244 TVQTIILNVMYQKSKSKAETNDQASPAAE    272


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