Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03813 and BPUM_2295

See DNA alignment / Visit BSNT_03813 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence pep-align/BSNT_03813___yqeM.1.24716.seq
#    -bsequence pep-align/BPUM_2295___yqeM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03813___yqeM-BPUM_2295___yqeM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03813___yqeM-BPUM_2295___yqeM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03813___yqeM
# 2: BPUM_2295___yqeM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     154/248 (62.1%)
# Similarity:   190/248 (76.6%)
# Gaps:           2/248 ( 0.8%)
# Score: 825.0
# 
#
#=======================================

BSNT_03813___      1 MIYQGFASVYDELMSHAPYDQWTNWIEASLPEKGRILDLACGTGEISIRL     50
                     |||||||.||||||:|||||:|..||:.::.....|:|:.|||||||:||
BPUM_2295___y      1 MIYQGFAGVYDELMTHAPYDEWVQWIQQNVKPNAAIIDVGCGTGEISLRL     50

BSNT_03813___     51 AEKGFEVTGIDLSEEMLSFAQQKV-SSSQPILFLQQDMREITGFDGQFDA     99
                     ||||..|||||||||||:|||||. :..|.|.||.|||||:|||:..|.|
BPUM_2295___y     51 AEKGHAVTGIDLSEEMLAFAQQKAQAKKQSIQFLHQDMRELTGFEQVFQA    100

BSNT_03813___    100 VVICCDSLNYLKTKNDVIETFNSVFRVLKSEGILLFDVHSSFKIAEVFPD    149
                     .|||||||||||.:|||.:||.::||:|:::|:||||||:.:|:.|:||.
BPUM_2295___y    101 AVICCDSLNYLKNENDVKKTFKNMFRLLEADGVLLFDVHTPYKMEEIFPG    150

BSNT_03813___    150 STFADQDEDISYIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETHEQRT    199
                     ||:|||.|:|||||||..|.|..|||||:||||.:|:.|.|:||||||||
BPUM_2295___y    151 STYADQGEEISYIWQSDKGDDMYSVIHDLSFFVKDGDVYQRYDETHEQRT    200

BSNT_03813___    200 FPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQKSKTIVS    247
                     ||.|.|...|.:.||:...||||||:..|...:||.|..|:|.|||| 
BPUM_2295___y    201 FPFETYAAFLVSAGFEQIEVTADFTNEAPGEFAERYFISAKKPKTIV-    247


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