Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03979 and BPUM_2381
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence pep-align/BSNT_03979.1.24716.seq
# -bsequence pep-align/BPUM_2381___yrrI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03979-BPUM_2381___yrrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03979-BPUM_2381___yrrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03979
# 2: BPUM_2381___yrrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 174/354 (49.2%)
# Similarity: 224/354 (63.3%)
# Gaps: 75/354 (21.2%)
# Score: 944.0
#
#
#=======================================
BSNT_03979 0 -------------------------------------------------- 0
BPUM_2381___y 1 MKKRPIQFLIYAAGVLLVLASLLILLQLDELWMPIFLLLKAVLIPLLIAI 50
BSNT_03979 1 ------------------------MVIYVLFFGGIGWALYKGVPVLIVQL 26
::||||||||||.|:|||.||:|.||
BPUM_2381___y 51 FISYLLYPIVERLHAGGLPRTVSLLLIYVLFFGGIGLAVYKGAPVMIKQL 100
BSNT_03979 27 TDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTETFFAGT 76
.:|||.||:.||||||.|.|:|:||..||||:|.|:|::|.|:||:.|..
BPUM_2381___y 101 NELSEQIPVLAETYNGALSHIHHHTSHWPDGLHDRLDRLIVQSETYAANG 150
BSNT_03979 77 IEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKR 126
.|..|...:.:|||.|:||.|||||||||||:..||:..|||||.|:|||
BPUM_2381___y 151 AERMILSCKVLLDYALVAALIPFLVFYMVKDMNTMKRAAWYLTPPSFRKR 200
BSNT_03979 127 GSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISG 176
|.||::.||:|||:|||||||||..:|..|.|..|:|.:||||:||::.|
BPUM_2381___y 201 GHAFVKAVDESLGNYIRGQLLVCSFIGGAATIVLWLFHIPYPLVLGMLIG 250
BSNT_03979 177 VTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPF 226
.|||||||||.|||:||:.||.|||||:|::|:|||.:|||:|.|:|||.
BPUM_2381___y 251 ATNVIPYFGPIIGAIPAVFIAFTISVKSVIIVLITVAVLQFLESNVLSPI 300
BSNT_03979 227 IVGRSLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRM- 275
||||||.||||||||.|||||||.|::|||||||..|:::|:::.::.|
BPUM_2381___y 301 IVGRSLHMHPVVIMLVLLAGGELFGLIGMILAVPTAAIIRVIIVQYILMR 350
BSNT_03979 276 RTEH 279
|:.|
BPUM_2381___y 351 RSVH 354
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