Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03988 and BPUM_2388
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence pep-align/BSNT_03988.1.24716.seq
# -bsequence pep-align/BPUM_2388___yrrD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03988-BPUM_2388___yrrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03988-BPUM_2388___yrrD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03988
# 2: BPUM_2388___yrrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 61/181 (33.7%)
# Similarity: 93/181 (51.4%)
# Gaps: 36/181 (19.9%)
# Score: 294.5
#
#
#=======================================
BSNT_03988 1 --------------------MRTCHEVEGFPVYSERTSCYLGAISDICFS 30
:|||.|:||..:|:..||..||:|.|||..
BPUM_2388___y 1 MSLEANAHDKTVPQKVVEHILRTCRELEGMSIYTGETSHSLGSIKDICLL 50
BSNT_03988 31 LKGDCLGFILAQKRFLHHHHTLLRACDI------SSILDDRILASVSSEQ 74
..|.|.|::|..|: :.|.. ..:.|..||.|.....
BPUM_2388___y 51 AGGSCGGYVLDGKK---------KDCAFIPFSAGDQLTDKGILVSCQEGV 91
BSNT_03988 75 LLPLPKSCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDG 124
.:........:.::|.|:::|.:|:.||:|||||||.:.|.|||||||||
BPUM_2388___y 92 GMDSSAPSLLFSKLKKKMMQSPDGENLGILEDVYFCTNSGTIVAYELSDG 141
BSNT_03988 125 FFSDLAGSKRQIQRADSLVEVRKDEIVLNG- 154
||::|:|.::|:|.|.:|:.|:|:.:|||.
BPUM_2388___y 142 FFTELSGIRKQLQAAGTLINVQKEALVLNRT 172
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