Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03999 and BPUM_2396

See DNA alignment / Visit BSNT_03999 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence pep-align/BSNT_03999___aspS.1.24716.seq
#    -bsequence pep-align/BPUM_2396___aspS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03999___aspS-BPUM_2396___aspS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03999___aspS-BPUM_2396___aspS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03999___aspS
# 2: BPUM_2396___aspS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     482/594 (81.1%)
# Similarity:   534/594 (89.9%)
# Gaps:           2/594 ( 0.3%)
# Score: 2528.0
# 
#
#=======================================

BSNT_03999___      1 --MFGRTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQ     48
                       :||||:|||::||..||::|.|||||||||||||||||||||||||||
BPUM_2396___a      1 MFVFGRTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQ     50

BSNT_03999___     49 VVFNPDVSKEALAVAEGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIH     98
                     .|||||:|||||..||.||||||||::|.||||||.|:|||||||.|||.
BPUM_2396___a     51 AVFNPDLSKEALETAESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQ    100

BSNT_03999___     99 ANGVTVLSAAKTPPFAISDQAEEVSEDVRLKHRYLDLRRPAMFQTMQMRH    148
                     ...|:||:.||||||.|||||:|||||||||:|||||||||||:||:|||
BPUM_2396___a    101 VETVSVLNEAKTPPFVISDQADEVSEDVRLKYRYLDLRRPAMFETMKMRH    150

BSNT_03999___    149 NVTKAVRSFLDENGFLDIETPILTKSTPEGARDYLVPSRVHEGEFYALPQ    198
                     .||:|.|.|||:||||||||||||||||||||||||||||||||||||||
BPUM_2396___a    151 EVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYLVPSRVHEGEFYALPQ    200

BSNT_03999___    199 SPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIEMSFMSQE    248
                     |||||||||||||::||||||||||||||||||||||||:||||||||||
BPUM_2396___a    201 SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQVDIEMSFMSQE    250

BSNT_03999___    249 DIMSLAEDMMAKIMRETKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDML    298
                     |||:|||:||||:|::.|||::.|||||||||||||.||||||||||:|.
BPUM_2396___a    251 DIMTLAEEMMAKVMKDVKGVDLTLPLPRMTYDEAMNSYGSDKPDTRFEMK    300

BSNT_03999___    299 LTDVSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFA    348
                     |.::||.|||::|||||.||.|||.||||||||.|.:|||||||||||||
BPUM_2396___a    301 LVNISDTVKDSDFKVFSGAVKNGGAVKAINVKGAAANYSRKDIDALGAFA    350

BSNT_03999___    349 ANYGAKGLAWVKVEADGVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGA    398
                     ||||||||||:|.|...:||||||||||.||.:|.|.|...|||||||.|
BPUM_2396___a    351 ANYGAKGLAWLKAEGSELKGPIAKFFDEAKQGELKEKLQVEEGDLLLFVA    400

BSNT_03999___    399 DQFEVVAASLGALRLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFY    448
                     |:..||..:|||||||||||..||||:.||||||:||||||.|.||||||
BPUM_2396___a    401 DKTSVVHDALGALRLKLGKELELIDESRFNFLWVVDWPLLEKDEEEGRFY    450

BSNT_03999___    449 AAHHPFTMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDI    498
                     |||||||||||:|||||||:||||||||||||||||||||||||||||||
BPUM_2396___a    451 AAHHPFTMPVRDDLELIETSPEDMKAQAYDLVLNGYELGGGSIRIFEKDI    500

BSNT_03999___    499 QEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGR    548
                     |||||:|||||.|||.|||||||:|||:|.||||||||||||||||||||
BPUM_2396___a    501 QEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGIALGLDRLVMLLAGR    550

BSNT_03999___    549 TNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVKN    592
                     :||||||||||||||||::|:|||.||:||||||.|:||.|||.
BPUM_2396___a    551 SNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ    594


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03999 and BPUM_2396

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
