Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04019 and BPUM_2412
See
DNA alignment /
Visit
BSNT_04019 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04019___tgt.1.24716.seq
# -bsequence pep-align/BPUM_2412___tgt.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04019___tgt-BPUM_2412___tgt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04019___tgt-BPUM_2412___tgt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04019___tgt
# 2: BPUM_2412___tgt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 342/381 (89.8%)
# Similarity: 367/381 (96.3%)
# Gaps: 0/381 ( 0.0%)
# Score: 1870.0
#
#
#=======================================
BSNT_04019___ 1 MAEQPIRYEFIKECKQTGARLGKVHTPHGSFETPVFMPVGTLATVKTMSP 50
|::.||||||||.|||||||||:||||||||:||||||||||||||||:|
BPUM_2412___t 1 MSQLPIRYEFIKSCKQTGARLGRVHTPHGSFDTPVFMPVGTLATVKTMAP 50
BSNT_04019___ 51 EELKAMDAGIILSNTYHLWLRPGQDIVKEAGGLHKFMNWDRAILTDSGGF 100
||||||:||||||||||||||||.||||||||||||||||||||||||||
BPUM_2412___t 51 EELKAMEAGIILSNTYHLWLRPGHDIVKEAGGLHKFMNWDRAILTDSGGF 100
BSNT_04019___ 101 QVFSLSKFRNIEEEGVHFRNHLNGDKLFLSPEKAMEIQNALGSDIMMAFD 150
||||||:||.|||||||||||||||||||||||||:||||||||||||||
BPUM_2412___t 101 QVFSLSEFRKIEEEGVHFRNHLNGDKLFLSPEKAMDIQNALGSDIMMAFD 150
BSNT_04019___ 151 ECPPYPAEYDYMKRSVERTSRWAERCLNAHNRQDEQGLFGIVQGGEYEDL 200
|||||||||||||||||||||||||||.||.|.::||||||:||||||:|
BPUM_2412___t 151 ECPPYPAEYDYMKRSVERTSRWAERCLTAHQRPEDQGLFGIIQGGEYEEL 200
BSNT_04019___ 201 RTQSAKDLISLDFPGYAIGGLSVGEPKDVMNRVLEFTTPLLPKDKPRYLM 250
|.||||||:|||||||||||||||||||||||||||||||||.|||||||
BPUM_2412___t 201 RKQSAKDLVSLDFPGYAIGGLSVGEPKDVMNRVLEFTTPLLPADKPRYLM 250
BSNT_04019___ 251 GVGSPDALIDGAIRGVDMFDCVLPTRIARNGTVFTAEGRLNMKNAKFERD 300
||||||:|||||||||||||||||||||||||:.|:||||.:||||:|||
BPUM_2412___t 251 GVGSPDSLIDGAIRGVDMFDCVLPTRIARNGTLMTSEGRLVVKNAKYERD 300
BSNT_04019___ 301 FRPIDEECDCYTCKNYTRAYIRHLIRCNETFGLRLTTYHNLHFLLHLMEQ 350
||||||.||||||||||||||||||:.|||||:||||||||||||.||||
BPUM_2412___t 301 FRPIDENCDCYTCKNYTRAYIRHLIKTNETFGIRLTTYHNLHFLLKLMEQ 350
BSNT_04019___ 351 VRQAIREDRLGDFREEFFERYGYNKPNAKSF 381
||:||||||||||:||||||||:|:||||:|
BPUM_2412___t 351 VREAIREDRLGDFKEEFFERYGFNEPNAKNF 381
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.