Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04025 and BPUM_2417
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04025___bofC.1.24716.seq
# -bsequence pep-align/BPUM_2417___bofC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04025___bofC-BPUM_2417___bofC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04025___bofC-BPUM_2417___bofC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04025___bofC
# 2: BPUM_2417___bofC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 96/183 (52.5%)
# Similarity: 117/183 (63.9%)
# Gaps: 26/183 (14.2%)
# Score: 465.0
#
#
#=======================================
BSNT_04025___ 1 ----MKRFSTAYLLLGILCSAAVFLIGAPSRALGAEVEHYEPLQ-----V 41
||.|.|..::..:|..| |::|..|.|| :
BPUM_2417___b 1 MKVKMKCFVTGLIMTSVLFFA-------------ADMEGKEHLQKQSNSI 37
BSNT_04025___ 42 HVQLEKVYLDGDVSIEHRHEKVFSMDDFWAAYAGWTLVEQKKGYVLFRKQ 91
.|||||||||||||||.....:...|.||:.|.||||||||:.:.|||||
BPUM_2417___b 38 TVQLEKVYLDGDVSIERHRASLEDKDTFWSQYKGWTLVEQKEDFALFRKQ 87
BSNT_04025___ 92 MDDISPLSKVNGYIGVSDNGVISTFHGRPEPASEPIQSFFQIDLERLESH 141
:||||||||.|||||:|::||||||||||:..:|||..|||||..|||||
BPUM_2417___b 88 IDDISPLSKANGYIGLSEDGVISTFHGRPDGWAEPIHLFFQIDTSRLESH 137
BSNT_04025___ 142 MQKNLLKGIPFRTKAEFEDVIEHMKTYSG---- 170
:::.|.:|||||||.|||.|:|.||.|..
BPUM_2417___b 138 VEEQLEQGIPFRTKDEFEHVLEVMKPYRNEISF 170
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