Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04065 and BPUM_2441
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence pep-align/BSNT_04065___mreD.1.24716.seq
# -bsequence pep-align/BPUM_2441___mreD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04065___mreD-BPUM_2441___mreD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04065___mreD-BPUM_2441___mreD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04065___mreD
# 2: BPUM_2441___mreD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 103/172 (59.9%)
# Similarity: 142/172 (82.6%)
# Gaps: 0/172 ( 0.0%)
# Score: 575.0
#
#
#=======================================
BSNT_04065___ 1 MKRFLLPFVMMLVFSAESIFTDLVHFPFVTDDQVLAPRFLMLVLIFMSAF 50
|:|.||.|||:.:|..:|||.|||..|||:|:|:|||.|::|.|:||:||
BPUM_2441___m 1 MRRVLLAFVMLFIFVFDSIFVDLVKLPFVSDNQILAPHFILLALVFMTAF 50
BSNT_04065___ 51 INQKHAMIYGFIFGFLYDMNYTSLLGVYMFGFAGLCYLASKAFKVLHTNA 100
:|||:.:|:|||||.|||::||.:|||:||||..||||.:||||||.||.
BPUM_2441___m 51 VNQKYGVIFGFIFGLLYDISYTGILGVHMFGFGALCYLLAKAFKVLQTNM 100
BSNT_04065___ 101 FVVILIAVLAVCLLEFYVFGIQSLIHKDIMTFNGFVLDRFIPTILLNIAA 150
.||:.::::||.::||||:|:|:.|...||.||.:|::|||||||||.||
BPUM_2441___m 101 LVVVFLSIIAVSVMEFYVYGVQATIQPGIMPFNTYVIERFIPTILLNTAA 150
BSNT_04065___ 151 ALILVLPFRLFFMSLKKELRDE 172
:||||:|.||||:::|:||.||
BPUM_2441___m 151 SLILVVPLRLFFINMKQELIDE 172
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