Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04140 and BPUM_2491

See DNA alignment / Visit BSNT_04140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_04140___rph.1.24716.seq
#    -bsequence pep-align/BPUM_2491___rph.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04140___rph-BPUM_2491___rph.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04140___rph-BPUM_2491___rph.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04140___rph
# 2: BPUM_2491___rph
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     199/245 (81.2%)
# Similarity:   218/245 (89.0%)
# Gaps:           3/245 ( 1.2%)
# Score: 1007.0
# 
#
#=======================================

BSNT_04140___      1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPF     50
                     ||.|.|.:||||.|..:..:|:||||||||:|||||||||||:|||||||
BPUM_2491___r      1 MRLDERHYDELRKIEIEAGYITHPEGSVLISAGNTKVICNASIEDRVPPF     50

BSNT_04140___     51 LRGGGKGWITAEYSMLPRATNQRTIRESSKGKISGRTMEIQRLIGRALRA    100
                     |||.||||||||||||||||.|||||||||||::||||||||||||||||
BPUM_2491___r     51 LRGEGKGWITAEYSMLPRATAQRTIRESSKGKVTGRTMEIQRLIGRALRA    100

BSNT_04140___    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTI    150
                     ||||||||||||||||||||||||||||||||||:||.:||.||...|.|
BPUM_2491___r    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFVAMTLAIQKLRAEGAI    150

BSNT_04140___    151 KTSPITDFLAAISVGIDKEQGILLDLNYEEDSSAEVDMNVIMTGSGRFVE    200
                     |.:||||:|||||||||.:||:||||||||||||||||||||||:|||||
BPUM_2491___r    151 KQNPITDYLAAISVGIDSQQGLLLDLNYEEDSSAEVDMNVIMTGAGRFVE    200

BSNT_04140___    201 LQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEVLGDSLPELK    245
                     |||||||||||||.|||||.||||||:|||:|||.|.|:.:.   
BPUM_2491___r    201 LQGTGEEATFSREQLNGLLDLAEKGIKELIEKQKAVTGEVIE---    242


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