Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04174 and BPUM_2519

See DNA alignment / Visit BSNT_04174 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_04174___yshA.1.24716.seq
#    -bsequence pep-align/BPUM_2519___yshA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04174___yshA-BPUM_2519___yshA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04174___yshA-BPUM_2519___yshA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04174___yshA
# 2: BPUM_2519___yshA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      68/85 (80.0%)
# Similarity:    79/85 (92.9%)
# Gaps:           0/85 ( 0.0%)
# Score: 355.0
# 
#
#=======================================

BSNT_04174___      1 MSDGKKTKTTVDIYGQHFTIVGEESRAHMRYVAGIVDDKMREINEKNPYL     50
                     ||||.||||||:||||.:||:|:|::.|||:||.||||||||||||||||
BPUM_2519___y      1 MSDGGKTKTTVEIYGQSYTIIGQETKMHMRHVASIVDDKMREINEKNPYL     50

BSNT_04174___     51 DINKLAVLTAVNVVHDYVKLQEKCEKLERQLKEKD     85
                     |||||||||||||||||:||:|:.||||.|||||:
BPUM_2519___y     51 DINKLAVLTAVNVVHDYLKLKEQYEKLEIQLKEKE     85


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