Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04210 and BPUM_2529

See DNA alignment / Visit BSNT_04210 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_04210___ysdA.1.24716.seq
#    -bsequence pep-align/BPUM_2529___ysdA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04210___ysdA-BPUM_2529___ysdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04210___ysdA-BPUM_2529___ysdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04210___ysdA
# 2: BPUM_2529___ysdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      41/91 (45.1%)
# Similarity:    63/91 (69.2%)
# Gaps:           6/91 ( 6.6%)
# Score: 237.0
# 
#
#=======================================

BSNT_04210___      1 --MIIAAYLLLINLCGFWVMGIDKRKAQQHKWRISEDRLWLIAIVFGALG     48
                       :.:...|:|:|..||::||.|||:|:.|||||||..||..|::|||.|
BPUM_2529___y      1 MNIALIVLLILVNGYGFFLMGEDKRRAKAHKWRISEAHLWSAAVLFGAAG     50

BSNT_04210___     49 VWLGMQTFRHKTKHASFKYGVPLLLVIEAILIAIYYSPFDL     89
                     .:||||.|||||||.:|:.|:|:|::::.|::...:.    
BPUM_2529___y     51 SYLGMQYFRHKTKHPAFQIGMPVLIMVQLIILGYQFI----     87


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