Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04217 and BPUM_2534

See DNA alignment / Visit BSNT_04217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_04217___lrgA.1.24716.seq
#    -bsequence pep-align/BPUM_2534___ysbA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04217___lrgA-BPUM_2534___ysbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04217___lrgA-BPUM_2534___ysbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04217___lrgA
# 2: BPUM_2534___ysbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      92/147 (62.6%)
# Similarity:   115/147 (78.2%)
# Gaps:           1/147 ( 0.7%)
# Score: 438.0
# 
#
#=======================================

BSNT_04217___      1 MSAKKVYGFLTQAFIFAVIMLVSNMIAAIVPIPIPASVVGLVLLFLLLCL     50
                     |||.||||||:||||||.:|.|||:|:..:|||:||||:||||||:||..
BPUM_2534___y      1 MSATKVYGFLSQAFIFATVMFVSNLISMYLPIPMPASVIGLVLLFVLLTT     50

BSNT_04217___     51 KVIKLEQVETLGTSLTSLIGFLFVPSGISVMNSLGVMQQYGLQIVLVILL    100
                     |::||||||.||||||.||.||||||||||:.||||||:.|:|:|.||::
BPUM_2534___y     51 KIVKLEQVEQLGTSLTGLISFLFVPSGISVIQSLGVMQEVGVQVVGVIII    100

BSNT_04217___    101 ATIILLGATGLFSQLILSLSGK-RKTAADMKTKTVQSPQNNNELVHH    146
                     |||:||.||||||||::.||.| :|.....::|:..|..|......|
BPUM_2534___y    101 ATIMLLAATGLFSQLLMQLSEKPQKRKETKESKSTPSHSNKPASSTH    147


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