Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04238 and BPUM_2547
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence pep-align/BSNT_04238___gapB.1.24716.seq
# -bsequence pep-align/BPUM_2547___gapB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04238___gapB-BPUM_2547___gapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04238___gapB-BPUM_2547___gapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04238___gapB
# 2: BPUM_2547___gapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 283/340 (83.2%)
# Similarity: 317/340 (93.2%)
# Gaps: 0/340 ( 0.0%)
# Score: 1503.0
#
#
#=======================================
BSNT_04238___ 1 MKVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASYSAETLAHLIKYDTI 50
||||.|||||||||||||||||||||||:||:||||.||||||||||||.
BPUM_2547___g 1 MKVKAAINGFGRIGRMVFRKAMLDDQIQIVAVNASYPAETLAHLIKYDTN 50
BSNT_04238___ 51 HGRYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKF 100
||||:.:|:|.:|:||||||:|||||:||||||||.|..||||:||||||
BPUM_2547___g 51 HGRYECDVIAEDDALIVNGKRVLLLNNRDPKQLPWGELGIDIVIEATGKF 100
BSNT_04238___ 101 NAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNA 150
|:||:|||||:||||||:|||||||||||||||||||..|.|:||:||||
BPUM_2547___g 101 NSKDQAMGHIDAGAKKVVLTAPGKNEDVTIVMGVNEDDLDPEKHVVISNA 150
BSNT_04238___ 151 SCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA 200
||||||||||||:||:||||::||||||||||||||||||||||||||||
BPUM_2547___g 151 SCTTNCLAPVVKLLDDEFGIDNGLMTTVHAYTNDQKNIDNPHKDLRRARA 200
BSNT_04238___ 201 CGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKT 250
|.:|||||||||||||||||||:|||||||||||||.|||:||||||||.
BPUM_2547___g 201 CAQSIIPTTTGAAKALSLVLPHMKGKLHGLALRVPVSNVSMVDLVVDLKK 250
BSNT_04238___ 251 DVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTM 300
||||||||.||..|:|||:.|:|||:||||||||:||||:|||:||||||
BPUM_2547___g 251 DVTAEEVNAAFSNASKTSLSGILDYTDEPLVSTDFNTNPYSAVVDGLTTM 300
BSNT_04238___ 301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV 340
||.|||||||||||||||||||||||::.|.::||..|||
BPUM_2547___g 301 VMGDRKVKVLAWYDNEWGYSCRVVDLVKFVGSQMKELSAV 340
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