Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04248 and BPUM_2552
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_04248___phoR.1.24716.seq
# -bsequence pep-align/BPUM_2552___phoR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04248___phoR-BPUM_2552___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-BPUM_2552___phoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: BPUM_2552___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity: 317/586 (54.1%)
# Similarity: 421/586 (71.8%)
# Gaps: 13/586 ( 2.2%)
# Score: 1604.0
#
#
#=======================================
BSNT_04248___ 1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL 50
|:|.|.||||..:..:.:||..|||||..:|....:.|..|.:|||:.:|
BPUM_2552___p 1 MSKIRTRLFSGLIFLLFIVFVALGLFLDHMFHVFYETKLTERMEKESSFL 50
BSNT_04248___ 51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ 100
.|.::..:|..:.|::::..|....|::||::|..|.::: :.|::....
BPUM_2552___p 51 LSSMNGDDLKAKQNKEVLNQAKQHFDMNASIVDVKGNIIH-TTGQAEQKA 99
BSNT_04248___ 101 KVQALVSGH----EGIL--STTDNKLYYGLSLRSEGEKTGYVLLSAS-EK 143
.:|..::.. :|:: ...|...:|.:.:..:.|..||:.|.|| |.
BPUM_2552___p 100 VIQNTLNNERLQTKGVVIDDEKDALFHYAVPILKQNEPAGYLFLQASYEP 149
BSNT_04248___ 144 SDGLKGELWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSK 193
.:.:.|:||..|...|.:|.|:||:|...|:.:|.:.|:.||.||.:|.:
BPUM_2552___p 150 LNEIDGQLWLALAFCLGSAIIIIVFFGYRMSMKYVKPIDYATKVAKQLER 199
BSNT_04248___ 194 GNYDARTYGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIENI 243
||||...|...:..:.:|..:|..||..|.|||...|||||||.||||||
BPUM_2552___p 200 GNYDTNHYEELMIETSELNTSMKRLAGSLQEMTSAGEMQRDRLQTVIENI 249
BSNT_04248___ 244 GSGLIMIDGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQLVE 293
|:|:|:||..|:|:||||::.|||.:..:..:.:|||:||.|||:|:|::
BPUM_2552___p 250 GAGIILIDKMGYIHLVNRTFRKQFKVQKHIYMHKLYHEAFTHEEIIELID 299
BSNT_04248___ 294 DIFMTETKKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTE 343
:|||||||..|.|||.:.||||||:||||||:..|||||||||||||:||
BPUM_2552___p 300 EIFMTETKVRKFLRLAVDIERRYFQVDGVPILSTDDEWKGIVLVFHDVTE 349
BSNT_04248___ 344 TKKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSI 393
||:||||||||||||||||||||||||||:|||||||::|||||:|||||
BPUM_2552___p 350 TKQLEQMRKDFVANVSHELKTPITSIKGFSETLLDGAIDDKEALTEFLSI 399
BSNT_04248___ 394 ILKESERLQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKHKA 443
|||||.||::|:||||||||||||.|.|:|:.....::|.||:.||..||
BPUM_2552___p 400 ILKESVRLETLIQDLLDLSKIEQQQFKLNIQEANATEILQEIQVLLNQKA 449
BSNT_04248___ 444 DEKGISLHLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAINV 493
.||||.||:.|||:|.||..||.||||:||||||||||||||||||.|:.
BPUM_2552___p 450 TEKGIQLHVRVPKEPVYVMADPLRLKQIFLNLVNNALTYTPEGGSVTISA 499
BSNT_04248___ 494 KPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAI 543
:||:...:.:|||:|||::|.|||||||||||:|||||||||||||||||
BPUM_2552___p 500 RPRKGAYEFDVADTGIGMKKSEIPRIFERFYRIDKDRSRNSGGTGLGLAI 549
BSNT_04248___ 544 VKHLIEAHEGKIDVTSEPGRGTVFTVTLKRAAEKSA 579
||||:|||||.|.|.|:.|:||.|||:||..
BPUM_2552___p 550 VKHLVEAHEGTISVRSKQGKGTTFTVSLKST----- 580
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