Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04299 and BPUM_2585
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence pep-align/BSNT_04299___sppA.1.24716.seq
# -bsequence pep-align/BPUM_2585___sppA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04299___sppA-BPUM_2585___sppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04299___sppA-BPUM_2585___sppA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04299___sppA
# 2: BPUM_2585___sppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 232/335 (69.3%)
# Similarity: 281/335 (83.9%)
# Gaps: 2/335 ( 0.6%)
# Score: 1193.0
#
#
#=======================================
BSNT_04299___ 1 MNAKRWIALVIALGIFGVSIIVSISMSFFESVKGAQTDLTSLTDESQEKT 50
||||||:||:||||:||.||::|::.:.:||....:... ...||.:||.
BPUM_2585___s 1 MNAKRWVALIIALGVFGFSIVISVTTALYESFNDNKMSY-QFGDEIEEKV 49
BSNT_04299___ 51 LENGSLSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDK 100
||:||.:.||||||::|||||||.:|||||.:||:||.|||.||:||||.
BPUM_2585___s 50 LEDGSGAGKIAVLEINGTIQDNGGASSLLGGEGYDHRAFLKELEKAKDDA 99
BSNT_04299___ 101 TVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGY 150
:|||::|:||||||||||||||||||||:|| .|||||||||||||||||
BPUM_2585___s 100 SVKGVLLRVNSPGGGVYESAEIHKKLEEVKK-AKKPIYVSMGSMAASGGY 148
BSNT_04299___ 151 YISAAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHKD 200
|:|..|.||||:||||||||||||:|:|||||||.|||.:||||||..||
BPUM_2585___s 149 YVSTPAKKIFASPETLTGSLGVIMQSLNYSKLADNLGIKYETIKSGKFKD 198
BSNT_04299___ 201 IMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRSMSKAEVKKIADGRV 250
||||:|:|||:|::||||||||||||||.|||:||.|||.:|||||||||
BPUM_2585___s 199 IMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEGRGMSKQDVKKIADGRV 248
BSNT_04299___ 251 YDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYEESFGLGSLF 300
|||.|||...||||||:|:|.|.||||:.|.||.|:||||.:|||..|||
BPUM_2585___s 249 YDGTQAKSNGLVDELGYYEDAIKAMKKNEKGLKGATVISYSQSFGWNSLF 298
BSNT_04299___ 301 SMGANKMFKSEIDFLNMREILSQSGSPRMMYLYAK 335
:|.|:|:|||||||||::|.|:.|...:.||||:|
BPUM_2585___s 299 NMSASKLFKSEIDFLNLKETLAGSNGSKPMYLYSK 333
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