Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04427 and BPUM_2594

See DNA alignment / Visit BSNT_04427 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_04427___ytsC.1.24716.seq
#    -bsequence pep-align/BPUM_2594___ytsC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04427___ytsC-BPUM_2594___ytsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04427___ytsC-BPUM_2594___ytsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04427___ytsC
# 2: BPUM_2594___ytsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     198/253 (78.3%)
# Similarity:   223/253 (88.1%)
# Gaps:           0/253 ( 0.0%)
# Score: 1009.0
# 
#
#=======================================

BSNT_04427___      1 MVILEANKIRKSYGNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLL     50
                     |.||||.||.||||||.||||||.|||:.||.||||||||.|||||||||
BPUM_2594___y      1 MNILEARKIYKSYGNKFNKQEVLSGIDLTIEAGEFVSIMGPSGSGKTTLL     50

BSNT_04427___     51 NVLSSIDQVSHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTL    100
                     |||||||.||.|:|.|...:||.||::|||||||:.|||:||||||||||
BPUM_2594___y     51 NVLSSIDHVSSGSIRIADAEMTQMKDQQLAEFRKKQLGFVFQDYNLLDTL    100

BSNT_04427___    101 TVKENILLPLSITKLSKKEANRKFEEVAKELGIYELRDKYPNEISGGQKQ    150
                     ||||||||||||:|..||||..:|:::|:::||||||||||||:||||||
BPUM_2594___y    101 TVKENILLPLSISKTPKKEAFERFQQLAEDMGIYELRDKYPNELSGGQKQ    150

BSNT_04427___    151 RTSAGRAFIHDPSIIFADEPTGALDSKSASDLLNKLSQLNQKRNATIIMV    200
                     ||||.|||||:||:||||||||||||||||||||||...|:||.|||:||
BPUM_2594___y    151 RTSAVRAFIHEPSLIFADEPTGALDSKSASDLLNKLQDFNRKRKATIVMV    200

BSNT_04427___    201 THDPVAASYCGRVIFIKDGQMYTQLNKGGQDRQTFFQDIMKTQGVLGGVQ    250
                     |||||||||..|||||||||:|||||||..:|:.||:||||||||||||:
BPUM_2594___y    201 THDPVAASYSRRVIFIKDGQIYTQLNKGALERKMFFEDIMKTQGVLGGVK    250

BSNT_04427___    251 HEH    253
                     |||
BPUM_2594___y    251 HEH    253


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