Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04463 and BPUM_2704

See DNA alignment / Visit BSNT_04463 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04463___ytkA.1.24716.seq
#    -bsequence pep-align/BPUM_2704___ytkA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04463___ytkA-BPUM_2704___ytkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04463___ytkA-BPUM_2704___ytkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04463___ytkA
# 2: BPUM_2704___ytkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      78/148 (52.7%)
# Similarity:   105/148 (70.9%)
# Gaps:           7/148 ( 4.7%)
# Score: 400.5
# 
#
#=======================================

BSNT_04463___      1 MKKML--VVLLFSAFLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGE     48
                     |:|||  :|||   .||:.||:..:.:...|.||:|:|||||||:|...|
BPUM_2704___y      1 MRKMLGMIVLL---LLLSACGNSAANSGKGEVPELLEVKLTGPEQVEKNE     47

BSNT_04463___     49 SAAYEAAVSYGDEAVTDADEVEFEVWKEGEKDASQMFKAKQE-KGVYRLE     97
                     |...:|||:|||..|.|||:|:|||||:|:||.|:|.:.|:| ||||.|.
BPUM_2704___y     48 SVIVKAAVTYGDTPVDDADDVQFEVWKDGDKDNSKMIQPKKENKGVYELH     97

BSNT_04463___     98 TTFKEDGVYTVQSHVTAKKQHSMPTLKVQVGDADAASNQSEEEHSHHH    145
                     |.||:||:|.:|.|||||:||:||...:.|||....::.:|||.||| 
BPUM_2704___y     98 TAFKKDGLYIIQVHVTAKQQHNMPKTNIHVGDVKKENSSTEEETSHH-    144


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