Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04483 and BPUM_2717

See DNA alignment / Visit BSNT_04483 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_04483___ytxM.1.24716.seq
#    -bsequence pep-align/BPUM_2717___ytxM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04483___ytxM-BPUM_2717___ytxM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04483___ytxM-BPUM_2717___ytxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04483___ytxM
# 2: BPUM_2717___ytxM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     146/274 (53.3%)
# Similarity:   197/274 (71.9%)
# Gaps:           0/274 ( 0.0%)
# Score: 775.0
# 
#
#=======================================

BSNT_04483___      1 MGTVNITVSDGIRYAVADEGPNASEAVVCLHGFTGSKQSWTFLDEMLSDS     50
                     |.:..|.:.||:.|.|.|:.|:...|.:||||||||..||.||:..:.::
BPUM_2717___y      1 MSSFIIRMRDGVAYEVIDQNPSGENATLCLHGFTGSAASWNFLNAYMENT     50

BSNT_04483___     51 RLIKIDCLGHGETDAPLNGKRYSTSRQVSDLAEILNQLKLHKVKLIGYSM    100
                     |||:|..||||.||:|.:.:||:.|.|::||||||||||||||.::||||
BPUM_2717___y     51 RLIQISLLGHGRTDSPESIRRYAMSHQLADLAEILNQLKLHKVNILGYSM    100

BSNT_04483___    101 GGRLAYSFAMTYPERVSALVLESTTPGLKTLGERRERIMRDRKLADFILR    150
                     |||:|.|||..|.|||:.|:||||:|||:|..||..|:..|.:||..:..
BPUM_2717___y    101 GGRIALSFASRYSERVNKLILESTSPGLRTFKERMARLKHDHQLAQKMRD    150

BSNT_04483___    151 DGLKAFVAYWENIPLFSSQQRLAEDIRHRIRSGRLRNNKIGLANSLTGMG    200
                     :||..||.:||:||||:||:.|:...:.::|.|||:.|.:|||.||.|:|
BPUM_2717___y    151 EGLVKFVDFWESIPLFASQKTLSAHAQAQLRKGRLKANPLGLARSLEGIG    200

BSNT_04483___    201 TGSQPSFWSRVEEIDVPVLLICGEWDEKFCAINQEVHKMLPSSRIEIVPK    250
                     ||||||.|..::.:::|||||||..|||||.|...:.:.|..|::.:..:
BPUM_2717___y    201 TGSQPSVWKALKHLNLPVLLICGALDEKFCNIATRMQQELEGSQLMLAEQ    250

BSNT_04483___    251 AGHTVHVEQPRLFGKIVSEFLTSI    274
                     ||||||||||..||||||||:|..
BPUM_2717___y    251 AGHTVHVEQPHFFGKIVSEFITQD    274


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