Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04485 and BPUM_2718

See DNA alignment / Visit BSNT_04485 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_04485___menD.1.24716.seq
#    -bsequence pep-align/BPUM_2718___menD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04485___menD-BPUM_2718___menD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04485___menD-BPUM_2718___menD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04485___menD
# 2: BPUM_2718___menD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     353/580 (60.9%)
# Similarity:   441/580 (76.0%)
# Gaps:           1/580 ( 0.2%)
# Score: 1856.0
# 
#
#=======================================

BSNT_04485___      1 MTVNPITHYIGSFIDEFALSGITDAVVCPGSRSTPLAVLCAAHPDISVHV     50
                     |....:|.|||..:|||...|:.:|||||||||||||:|..||.||:|||
BPUM_2718___m      1 MNNQIMTTYIGRLMDEFVQGGVQEAVVCPGSRSTPLAMLALAHQDINVHV     50

BSNT_04485___     51 QIDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAVVEAHYSRVPII    100
                     .:|||||.|:|||||||.|.||||||||||||||||||:|||||||||:|
BPUM_2718___m     51 LVDERSAAFYALGLAKASQTPVLLICTSGTAAANFYPAIVEAHYSRVPLI    100

BSNT_04485___    101 VLTADRPHELREVGAPQAINQHFLFGNFVKFFTDSALPEESPQMLRYIRT    150
                     |||||||||||||||||||:|.||||.|||:|||.||||||..||||::|
BPUM_2718___m    101 VLTADRPHELREVGAPQAIDQQFLFGKFVKWFTDLALPEESQMMLRYVQT    150

BSNT_04485___    151 LASRAAGEAQKRPMGPVHVNVPLREPLMPDLSDEPFGRMRTGRHVSVKTG    200
                     .|:||...:.:.|.|||.:||||||||:||||..||.|..|.|...:.||
BPUM_2718___m    151 AAARANHMSMQEPKGPVQINVPLREPLLPDLSIHPFDREETDRKKVLATG    200

BSNT_04485___    201 TQSVDRESLSDVAEMLAEAEKGMIVCGELHSDVDKENIITLSKALQYPIL    250
                     ....:.::||::..::..::||:|||||||:..:||.::.|||.|..|||
BPUM_2718___m    201 QAYPNDDALSEIVTVMNRSKKGLIVCGELHTQKEKEAVLRLSKDLHLPIL    250

BSNT_04485___    251 ADPLSNLRNGVHDKSTVIDAYDSFLKDDKLKRKLRPDVVIRFGPMPVSKP    300
                     |||||:||||......:||||||.|||:.|::.|.||:||||||||||||
BPUM_2718___m    251 ADPLSHLRNGHEHAELIIDAYDSLLKDEALQQHLLPDMVIRFGPMPVSKP    300

BSNT_04485___    301 VFLWLKDDPAIQQIVIDEDGGWRDPTQVSAHMIHCNASVFAEEIMAGLTA    350
                     :|.||:....:.|||:|..||:|||...::::|..:.:.|.:|::.....
BPUM_2718___m    301 LFKWLEKHAEVNQIVVDAAGGFRDPGLSASYIIESDVAAFVDEVVNRADQ    350

BSNT_04485___    351 ARSSEWLEKWQFVNGRFREHLQTISSEDVSFEGNLYRILQHLVPENSSLF    400
                     ...:.:|.:||..|..||.|....|.||:|||||:||.||||:|:.|.||
BPUM_2718___m    351 REDTSFLNRWQHANSSFRTHASHYSDEDLSFEGNVYRQLQHLLPKESVLF    400

BSNT_04485___    401 VGNSMPIRDVDTFFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEGTKAPV    450
                     :||||||||||||||.|.:|||:.:||||||||||||:|:|.....|.||
BPUM_2718___m    401 IGNSMPIRDVDTFFEAQSKPFRMMANRGANGIDGVVSTALGTYAALKQPV    450

BSNT_04485___    451 TLVIGDLSFYHDLNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTH    500
                     ||||||||||||:|||||||.:.|||||:|:||||||||||||||||:.:
BPUM_2718___m    451 TLVIGDLSFYHDMNGLLAAKLMDIPLTVVLLNNDGGGIFSFLPQASEEPY    500

BSNT_04485___    501 FEDLFGTPTGLDFKHAAALYGGTYSCPASWDEFKTAYAPQADKPGLHLIE    550
                     :|.||||||||:|::|:.|||||||.|::..||...|....::|||||||
BPUM_2718___m    501 YEKLFGTPTGLNFEYASKLYGGTYSKPSTKQEFHDVYKAHIEEPGLHLIE    550

BSNT_04485___    551 IKTDRQSRVQLHRDMLNEAVREVKKQWEL-    579
                     |:|||.|||..||.|:::.:.||||:..| 
BPUM_2718___m    551 IETDRHSRVSKHRQMMDDILEEVKKECLLS    580


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