Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04596 and BPUM_2787
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:14
# Commandline: needle
# -asequence pep-align/BSNT_04596___mcpA.1.24716.seq
# -bsequence pep-align/BPUM_2787.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04596___mcpA-BPUM_2787.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04596___mcpA-BPUM_2787.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04596___mcpA
# 2: BPUM_2787
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 392/664 (59.0%)
# Similarity: 512/664 (77.1%)
# Gaps: 4/664 ( 0.6%)
# Score: 1967.0
#
#
#=======================================
BSNT_04596___ 1 MMKKILQLIKQRSITRKLLVSFLSILIIPVVILAIFAYQSASSSLDRQMM 50
.|.:|..::.||::||::|||.||:.|:::||..:|.:||:||:.|:|
BPUM_2787 1 --MKFIQYFRKPSISKKLVLSFLFILLCPIIVLAFSSYHTASTSLNDQIM 48
BSNT_04596___ 51 GSALENVQQLNEIINTSIGEKENSADYFSEWLTKEKYNAKSNASIAEKFS 100
.||.|||:||::.|...:..|.::||:||:|:|::|...|....|..:|.
BPUM_2787 49 QSAKENVEQLDKNITKVVKVKTDAADFFSKWITEKKLKQKGTTDIQGRFE 98
BSNT_04596___ 101 QYISINKDVESIYTSDTKGH-FTRYPDLPMPSGYNPVERDWYKKAVANKG 149
|::|:|.|.|.|:.:.:.|. |:|||:..||:.|...||||||...|..|
BPUM_2787 99 QFMSMNDDTEGIFVASSDGKVFSRYPNKKMPADYVATERDWYKDGWAKNG 148
BSNT_04596___ 150 KVVITDPYKTASTNTMVVTIAQQTKDGSGVIAINMTIENLLKTTKKVNIG 199
::.::.||.||||.|:||||:::.:|||||||:|:.|.||:|.:..:|||
BPUM_2787 149 ELSVSAPYPTASTGTLVVTISKKLEDGSGVIAMNLDIANLVKESNSINIG 198
BSNT_04596___ 200 TQGYAFIMTKDKKVVAHPNEKSGTELKGDWLDKMLSADKGDFQYTMDGDK 249
.||||||.:.|:..||||.:|:||:|.|:||:|:.|.|:|...|..:|.:
BPUM_2787 199 KQGYAFIGSPDRTFVAHPTKKAGTKLSGEWLEKLYSQDEGSMSYMFEGKE 248
BSNT_04596___ 250 KKMAFDTNKLTGWKIGGTMYLDEIHEAAQPVLHLALIVLAAAIIIGIIVM 299
|:|.|.|||.|||||.|||::.|:.||||||.::|.|:||.|:|||.|::
BPUM_2787 249 KQMEFTTNKATGWKIVGTMFVTEVEEAAQPVFNMAAIILAGALIIGGILI 298
BSNT_04596___ 300 TLIIRSITTPLKQLVGSSKRISEGDLTETIDIRSKDELGELGKSFNNMAS 349
.|||||||.||..||.|||:||||||||.||::||||:|:||.|||.|:.
BPUM_2787 299 FLIIRSITKPLSILVSSSKKISEGDLTEKIDVQSKDEIGQLGTSFNEMSE 348
BSNT_04596___ 350 SLRSLIHAIQDSVDNVAASSEELTASAAQTSKATEHITLAIEQFSNGNEK 399
|||.:|.|:|.||:|||:|||||||||.||:|||||||.:||.||||||.
BPUM_2787 349 SLRDVIQAVQTSVENVASSSEELTASAGQTTKATEHITSSIETFSNGNEN 398
BSNT_04596___ 400 QNENIETAAEHIYQMNDGLTNMAQASEVITDSSVQSTEIASEGGKLVHQT 449
|:|.:|.:|.|:.|||:||..:|:.|:|||.||:||..:|..||:||.||
BPUM_2787 399 QSEMVEQSAAHLKQMNEGLNEVAETSDVITASSIQSRTVAESGGQLVEQT 448
BSNT_04596___ 450 IGQMNVIDKSVKEAEQVVRGLETKSKDITNILRVINGIADQTNLLALNAA 499
:|||..||.||||||.|:.|||.|||||||||.|||||||||||||||||
BPUM_2787 449 VGQMKTIDHSVKEAEGVINGLEHKSKDITNILGVINGIADQTNLLALNAA 498
BSNT_04596___ 500 IEAARAGEYGRGFSVVAEEVRKLAVQSADSAKEIEGLIIEIVKEINTSLG 549
||||||||.||||||||||||||||||:|||||||.|:.|||.||.||..
BPUM_2787 499 IEAARAGESGRGFSVVAEEVRKLAVQSSDSAKEIEKLVKEIVSEIETSQN 548
BSNT_04596___ 550 MFQSVNQEVQTGLDITDKTEMSFKRISEMTNQIAGELQNMSATVQQLSAS 599
||:|||:||:.||.|||:|:.||.:|::.|.:||..:.:|:.||::||..
BPUM_2787 549 MFKSVNEEVKNGLSITDQTKESFSQINQQTAEIATRINDMNTTVRELSKG 598
BSNT_04596___ 600 SEEVSGASEHIASISKESSAHIQDIAASAEEQLASMEEISSSAETLSSMA 649
||::|.|...||.:|:||||.|||||||||||||||||||||:.|||.||
BPUM_2787 599 SEQISKAVNEIADVSRESSASIQDIAASAEEQLASMEEISSSSTTLSQMA 648
BSNT_04596___ 650 EELRDMTKRFKIE- 662
|||||:.|:|||.
BPUM_2787 649 EELRDLIKKFKINE 662
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