Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04608 and BPUM_2796
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:19
# Commandline: needle
# -asequence pep-align/BSNT_04608___yugS.1.24716.seq
# -bsequence pep-align/BPUM_2796.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04608___yugS-BPUM_2796.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04608___yugS-BPUM_2796.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04608___yugS
# 2: BPUM_2796
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 320/430 (74.4%)
# Similarity: 378/430 (87.9%)
# Gaps: 1/430 ( 0.2%)
# Score: 1716.0
#
#
#=======================================
BSNT_04608___ 1 MLILQLIAIFVLIGITAVFVAAEFAIVKIRGSKINQLIESGDSRALAAHK 50
|.||.:..:.:||..||.||..||||||||||||||||||||.||:...|
BPUM_2796 1 MYILNVFLVILLIAATAFFVVTEFAIVKIRGSKINQLIESGDKRAIHVQK 50
BSNT_04608___ 51 IISNLDEYLSACQLGITITALGLGWLGEPTFERFLHPLFTMTGMPEPFNH 100
:|||||||||||||||||||||||||||||.|.||||||...|:......
BPUM_2796 51 LISNLDEYLSACQLGITITALGLGWLGEPTVEHFLHPLFEELGLHSALTD 100
BSNT_04608___ 101 IVTFVVAFIIVTFLHVVMGELAPKTVSIQKAEAVSLWIAKPLIWFYKITY 150
|::|::||:|:||||||:|||||||::|||||||||..|||||:||::.|
BPUM_2796 101 ILSFIIAFVIITFLHVVVGELAPKTIAIQKAEAVSLVTAKPLIFFYRVMY 150
BSNT_04608___ 151 PFIKALNGSASFLVKLFGFHSVKEHQVVISEEELRLILSESYEKGEINQS 200
||||||||:|..:||||||||||||:|.||||||||||||||||||||||
BPUM_2796 151 PFIKALNGAARGIVKLFGFHSVKEHEVAISEEELRLILSESYEKGEINQS 200
BSNT_04608___ 201 EFRYVNKIFEFDNRVAREIMIPRTEIAVISLEQSLEEAIHHIINERYTRY 250
|::|||||||||||||||||||||||:.|.:||:|::..|:::|||||||
BPUM_2796 201 EYKYVNKIFEFDNRVAREIMIPRTEISAIEIEQTLDDVTHYMLNERYTRY 250
BSNT_04608___ 251 PVIKDDKDHILGIINSKDMFKAYFLGQPIKLEQIMRPVIRVIESIPVQQL 300
||||:||||::|:|||||:|||.||.|.:.:|.:||||||||||.|||:|
BPUM_2796 251 PVIKEDKDHVIGVINSKDVFKASFLNQDVTIEDLMRPVIRVIESTPVQEL 300
BSNT_04608___ 301 LIRMQKERIHMAILVDEYGGTAGLVTVEDIIEEIVGEIRDEYDQDETPHI 350
||.||||||||::|||||||||||||||||:|||||||||||||||||||
BPUM_2796 301 LILMQKERIHMSVLVDEYGGTAGLVTVEDILEEIVGEIRDEYDQDETPHI 350
BSNT_04608___ 351 LKKGEHHYVMDGKALIDEVNDLLDIAIENEEIDTIAGWLLTQKMELKAGD 400
:|||:.||||||||||||||||||:||:|:::||||||::|.|.:::.||
BPUM_2796 351 VKKGDFHYVMDGKALIDEVNDLLDLAIDNDDVDTIAGWMMTHKFDIEIGD 400
BSNT_04608___ 401 VIQAEGCEFKILDAEDHHIRFVEIKKTDF- 429
.|:||||||.|:||||||||.:||||..|
BPUM_2796 401 TIEAEGCEFTIIDAEDHHIRTIEIKKIHFS 430
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