Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04686 and BPUM_2855

See DNA alignment / Visit BSNT_04686 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_04686___yueC.1.24716.seq
#    -bsequence pep-align/BPUM_2855.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04686___yueC-BPUM_2855.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04686___yueC-BPUM_2855.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04686___yueC
# 2: BPUM_2855
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:      51/165 (30.9%)
# Similarity:    88/165 (53.3%)
# Gaps:          10/165 ( 6.1%)
# Score: 225.0
# 
#
#=======================================

BSNT_04686___      1 -----MEKGIMICMLSFSLFIPSAAAAQTEENTDVAPNQYEKKDIEIDTN     45
                          ..||:.:.::|..|.||:|.||..:.:|:|.||:|::|.::|:::
BPUM_2855          1 MRLNLFVKGMALGVMSLFLLIPAAFAAGEDTDTNVKPNEYQEKKLDINSS     50

BSNT_04686___     46 YLHEDTYYEEKTELPEEQKDITF-DKPKDKDAELIKDLFTSTNAEDSNTI     94
                     .|.:.|.||:..:....:.||.| :.||.....|...||:........|.
BPUM_2855         51 ILRDQTKYEQSKKTSTVKTDIHFAEPPKTPGGSLSPQLFSDLKENPPKTS    100

BSNT_04686___     95 AAQSKQLGITFAEKPMTKTSSTETEDEQETSSLLLPMIYVVLILLGIAGI    144
                     |...:::.|:|.:..::..|.   ||:::.||.|||:|:...|:.||..:
BPUM_2855        101 AHMMEEMNISFRDAAVSTPSG---EDQEKQSSALLPIIFGCFIVFGIVVM    147

BSNT_04686___    145 VFLIPKVTAQENKKA    159
                     ..|||||..:..|| 
BPUM_2855        148 FILIPKVNVKAEKK-    161


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