Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04696 and BPUM_2861
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence pep-align/BSNT_04696___yukF.1.24716.seq
# -bsequence pep-align/BPUM_2861.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04696___yukF-BPUM_2861.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04696___yukF-BPUM_2861.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04696___yukF
# 2: BPUM_2861
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 275/409 (67.2%)
# Similarity: 329/409 (80.4%)
# Gaps: 2/409 ( 0.5%)
# Score: 1422.0
#
#
#=======================================
BSNT_04696___ 1 --MPNDPFKYSFDRLEDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTD 48
...||||||.||||||||.|||||.|||||||.:|:|||||||:|.||
BPUM_2861 1 MKKKTDPFKYSLDRLEDVADQISDVLNCPITIEDTHHRLLAYSTHNDFTD 50
BSNT_04696___ 49 PARTSTIIGRRVPEKVINKLWKDGTIPALLKTDQPIRVKQIDEVGLSNRV 98
||||||||.|||||||||:|||||.||.|||||:|:||.||.|||||:||
BPUM_2861 51 PARTSTIISRRVPEKVINRLWKDGIIPTLLKTDEPLRVPQIAEVGLSSRV 100
BSNT_04696___ 99 AISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMAAKAVKNKLLKLQIRKT 148
||||||:|:|||||||:|..:..|:||:..|:|||.|||||||.|||||:
BPUM_2861 101 AISIWKDKEVLGFIWAIESTQPFSEEDMDLLKMAAHAVKNKLLNLQIRKS 150
BSNT_04696___ 149 KNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMIIRINGEL 198
|.|||:||.||||||||||::|:|.|.|.:||:..|..::::|.|:..||
BPUM_2861 151 KTEERNQELFWKMLTGHIHEKDEMLDLFLRLGIRCPDTYAIIIFRLRDEL 200
BSNT_04696___ 199 TEKIEQQLQYLQETTQQVYVLLATVDSNELIILTSPKTDHPFQDLKQFAL 248
|:..|::|.||.||||||.|||.|||.:|.|||.||||:||.||:|||..
BPUM_2861 201 TDDTEKKLSYLLETTQQVQVLLTTVDFHEFIILVSPKTEHPLQDIKQFTS 250
BSNT_04696___ 249 STQKQLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFAEET 298
...:||.:||.|..|..|.||||::||.:..||:|||:||||||||..||
BPUM_2861 251 GMLQQLSDRYHIHHVQAAIGGIYDNISHIQPSYKEALAVLKTKERFPVET 300
BSNT_04696___ 299 KHFFSFSELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNLVETL 348
:...||||||||||||||.|||:.:.:.:|||||||.||..|.|||||||
BPUM_2861 301 ERLHSFSELGIYQYLDVLAEKRRGSSYSSYSLSKLEDYDLRHHSNLVETL 350
BSNT_04696___ 349 ERFIEADSNVNTASKLLNIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYL 398
||||:.|||.|.|:|.||||:||||||||||:.||||||||:|:|.||||
BPUM_2861 351 ERFIDCDSNANIAAKQLNIHINTLNYRLKRITDIAEIDLKNMNEKMTIYL 400
BSNT_04696___ 399 DIKLRHMDL 407
|:||:::.|
BPUM_2861 401 DMKLKNVHL 409
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