Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04720 and BPUM_2871

See DNA alignment / Visit BSNT_04720 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence pep-align/BSNT_04720___yuiA.1.24716.seq
#    -bsequence pep-align/BPUM_2871.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04720___yuiA-BPUM_2871.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04720___yuiA-BPUM_2871.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04720___yuiA
# 2: BPUM_2871
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      24/81 (29.6%)
# Similarity:    27/81 (33.3%)
# Gaps:          40/81 (49.4%)
# Score: 136.0
# 
#
#=======================================

BSNT_04720___      1 ----------------------------------MKTATTTASHACPFCS     16
                                                       |...|......|.:||
BPUM_2871          1 MDARFFFDRFSYLVIGNKVWYDKLSENLDKGVSNMNAHTKEKKSTCQYCS     50

BSNT_04720___     17 GKGYFQLILGGSETCPSCQGTGKDSHSFSSR     47
                     |||||||:|||||||..|:||||..      
BPUM_2871         51 GKGYFQLLLGGSETCEECKGTGKKL------     75


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