Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04927 and BPUM_2965

See DNA alignment / Visit BSNT_04927 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence pep-align/BSNT_04927___yvqF.1.24716.seq
#    -bsequence pep-align/BPUM_2965.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04927___yvqF-BPUM_2965.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04927___yvqF-BPUM_2965.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04927___yvqF
# 2: BPUM_2965
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     138/252 (54.8%)
# Similarity:   181/252 (71.8%)
# Gaps:          22/252 ( 8.7%)
# Score: 708.5
# 
#
#=======================================

BSNT_04927___      1 MTKKQLLGLIIALFGISMFLQIIGIGDLLFWPLFFLIAGYFLKKYSRDWL     50
                                .:|||::||:|||||..||||:||.:|||:|...|:.||
BPUM_2965          1 -----------MIFGINLFLKIIGIGADLFWPVFFALAGYWLHSRSKRWL     39

BSNT_04927___     51 GSVMYIFAAFLFLKNLFSITFNLFGYAFAAFLIYAGYRLIKGKPIFEPNE    100
                     |||.||||.|||||.|.:|||:|.||.||||||||||||:|.||:|:.::
BPUM_2965         40 GSVSYIFAGFLFLKFLLNITFSLTGYLFAAFLIYAGYRLLKNKPVFDIDK     89

BSNT_04927___    101 KQ----------VNLNKKEHHDPPKDVKHPDM-RSFFIGELQMMKQPFDL    139
                     |:          |||.|:......|....|.. ..|||||:::||:||.|
BPUM_2965         90 KEAPENDKPSLKVNLEKEGEQKKTKSQTKPHKEHDFFIGEVRLMKKPFQL    139

BSNT_04927___    140 NDLNVSGFIGDIKIDLSKAMIPEGESTIVISGVIGNVDIYVPSDLEVAVS    189
                     :||.:||||||:|||||||:|.|.||||||||:||:|||:||.|:||.||
BPUM_2965        140 SDLTISGFIGDVKIDLSKAIIAEEESTIVISGLIGDVDIFVPQDIEVCVS    189

BSNT_04927___    190 SAVFIGDINLIGSKKSGLSTKVYAASTDFSESKRRVKVSVSLFIGDVDVK    239
                     ::..|||:.:|..|:||..:|||..:.::.||||:||:|:||.||||||:
BPUM_2965        190 ASAAIGDMKIIDEKRSGFGSKVYVMTDNYDESKRKVKISISLLIGDVDVR    239

BSNT_04927___    240 YV    241
                     |:
BPUM_2965        240 YL    241


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