Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04940 and BPUM_2981

See DNA alignment / Visit BSNT_04940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence pep-align/BSNT_04940___yvrC.1.24716.seq
#    -bsequence pep-align/BPUM_2981.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04940___yvrC-BPUM_2981.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04940___yvrC-BPUM_2981.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04940___yvrC
# 2: BPUM_2981
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     193/318 (60.7%)
# Similarity:   242/318 (76.1%)
# Gaps:           6/318 ( 1.9%)
# Score: 974.5
# 
#
#=======================================

BSNT_04940___      1 MKKRAGIWTALLLAVVMLAGCGNPADQKDSKAKQKTE----VFPVTIDDA     46
                     |||...||.:|||.:.:||||........:|:.|..|    .|||:|.||
BPUM_2981          1 MKKLTAIWLSLLLVMGVLAGCAGAETDHKAKSSQNNETATAAFPVSIKDA     50

BSNT_04940___     47 SNQDVTIKKEPKKIVSLMPSNTEITYALGLGDKVVGVTTNDTYPKEVKKV     96
                     :.:.|.||::||:||||:|||||:.||||||||:||.:..|.|||||:||
BPUM_2981         51 AGKTVEIKEQPKRIVSLIPSNTEVAYALGLGDKMVGRSDFDNYPKEVEKV    100

BSNT_04940___     97 EKVGDMNVNVEKVISLKPDLVLAHESSMSASADAIKQLKDAGITVLTVND    146
                     ||:|.:..||||||||||||||||.|.| .|.|..|||:||||.||||||
BPUM_2981        101 EKIGGLEFNVEKVISLKPDLVLAHASQM-GSKDGFKQLEDAGIQVLTVND    149

BSNT_04940___    147 AQSFSEVYKSIEMIGEAGGAEKKADQLVKSMKSDLKDIQEKAKTISKDEE    196
                     |.||.:|||||.|||||.||:|.:.:||..||:.|.:|:::|:.||||::
BPUM_2981        150 ATSFKDVYKSINMIGEATGAKKASTKLVDEMKAKLNNIKKQAEAISKDKQ    199

BSNT_04940___    197 KSVFIEVSPDPDIYTTGKDTFMNEMLNVIHAKNAAADQTGWVQMTDEAIV    246
                     |:||:|||..|:|||||..|||:|||:||||||||.|||||||||:|:|:
BPUM_2981        200 KTVFVEVSGTPEIYTTGTHTFMDEMLSVIHAKNAAGDQTGWVQMTEESII    249

BSNT_04940___    247 KLNPDAIVTTDGVKAKAVEKRDGWSEINAVKHHRVYDVDPDLVTRSGPRL    296
                     |.|||.|||.||.....::|||||:.|.|||..:|:.::.||.:|.||||
BPUM_2981        250 KRNPDVIVTIDGSSLADLKKRDGWNAIKAVKEKQVFQLNTDLASRPGPRL    299

BSNT_04940___    297 IEGVEELAESIYPDTFKE    314
                     :||||.||:|||||||| 
BPUM_2981        300 VEGVEALAKSIYPDTFK-    316


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