Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04979 and BPUM_3003
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_04979.1.24716.seq
# -bsequence pep-align/BPUM_3003.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04979-BPUM_3003.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04979-BPUM_3003.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04979
# 2: BPUM_3003
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 149/227 (65.6%)
# Similarity: 180/227 (79.3%)
# Gaps: 7/227 ( 3.1%)
# Score: 785.0
#
#
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BSNT_04979 1 MALLPSSISASEFFTPVALSFQVAAVAGIVVIILGTLAGAWMSRASFFGK 50
|.:| ..:|.:|:.||.|||.|:|::..:.||..|.||:|.:|.||
BPUM_3003 1 MPML-----TEDFLSPIWLSIQVAIVSGLLATVFGTTIGFWMARTTFKGK 45
BSNT_04979 51 TALETCFMLPLVLPPTVVGFILIVIFGKHSFIGQAIEWIFQQPVIFTWWA 100
..:||..|:|||||||||||:|:|:|||||.||.||||||.|||||||||
BPUM_3003 46 MLVETLLMMPLVLPPTVVGFLLLVVFGKHSLIGGAIEWIFHQPVIFTWWA 95
BSNT_04979 101 AVIASAVVAFPLMYQSAKTGFADIDPDIQGAAMVDGASRWKVFIHISVPL 150
|||||.||||||||||||.||:.|:.||:|||.||||..::||.:|:|||
BPUM_3003 96 AVIASTVVAFPLMYQSAKAGFSTIESDIEGAAKVDGAHSFQVFAYITVPL 145
BSNT_04979 151 AYPSLLTGSILSLARALGEFGATLMFAGNIPGVTQTLPTAIYVALDSGNN 200
|.||||:|||||.|||||||||||||||||||.|||||||||||:|||..
BPUM_3003 146 ALPSLLSGSILSFARALGEFGATLMFAGNIPGKTQTLPTAIYVAIDSGRM 195
BSNT_04979 201 TLAWAWVVCIVVISFLMLFFIQQKKTH 227
.|||||.:|||::||:||..:::.|
BPUM_3003 196 ELAWAWTICIVILSFIMLLAVRRNK-- 220
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