Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04995 and BPUM_3008

See DNA alignment / Visit BSNT_04995 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_04995___bdbC.1.24716.seq
#    -bsequence pep-align/BPUM_3008___bdbC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04995___bdbC-BPUM_3008___bdbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04995___bdbC-BPUM_3008___bdbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04995___bdbC
# 2: BPUM_3008___bdbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:      90/138 (65.2%)
# Similarity:   119/138 (86.2%)
# Gaps:           1/138 ( 0.7%)
# Score: 534.0
# 
#
#=======================================

BSNT_04995___      1 MKNRIVFLYASWVVALIAMLGSLYFSEIRKFIPCELCWYQRILMYPLVLI     50
                     |||::::||::|:|:::|.:.|||.|||:|||||::||:|||.||||||:
BPUM_3008___b      1 MKNKLIYLYSAWIVSIVATMSSLYLSEIKKFIPCDMCWFQRIFMYPLVLL     50

BSNT_04995___     51 LGIATFQGDTRVKKYVLPMAIIGAFISIMHYLEQKVPGFSGIKPCVSGVP    100
                     ||||||:||.:||.||||:|:|||..||.||:|||:|||:.|:||:||:|
BPUM_3008___b     51 LGIATFRGDVKVKYYVLPLAVIGACFSIYHYMEQKIPGFASIRPCLSGIP    100

BSNT_04995___    101 CSGQYINWFGFITIPFLALIAFILIIIFMCLLKGEKSE    138
                     ||..|:|||||||||.|||||||||||.|.||..::. 
BPUM_3008___b    101 CSVDYLNWFGFITIPLLALIAFILIIISMLLLNAKED-    137


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