Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05131 and BPUM_3054
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_05131___pgm.1.24716.seq
# -bsequence pep-align/BPUM_3054___gpmI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05131___pgm-BPUM_3054___gpmI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05131___pgm-BPUM_3054___gpmI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05131___pgm
# 2: BPUM_3054___gpmI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 454/511 (88.8%)
# Similarity: 488/511 (95.5%)
# Gaps: 0/511 ( 0.0%)
# Score: 2408.0
#
#
#=======================================
BSNT_05131___ 1 MSKKPAALIILDGFGLRNETVGNAVALAKKPNFDRYWNQYPHQTLTASGE 50
|||||||||||||||||.||||||||.|||||||||||::||||||||||
BPUM_3054___g 1 MSKKPAALIILDGFGLRGETVGNAVAQAKKPNFDRYWNEFPHQTLTASGE 50
BSNT_05131___ 51 AVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDA 100
|||||:|||||||||||||||||||||||||||||||:||||:|:|||:|
BPUM_3054___g 51 AVGLPQGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIRDGEFEKNETFLEA 100
BSNT_05131___ 101 ISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTEVYIHGFL 150
::.||||:||||||||||||||||||.|||||||||||||||:|||||||
BPUM_3054___g 101 MTYAKENDKALHLFGLLSDGGVHSHIQHLFALLKLAKKEGLTKVYIHGFL 150
BSNT_05131___ 151 DGRDVGPQTAKTYINQLNDQIKEIGVGEIASISGRYYSMDRDKRWDRVEK 200
||||||.:|||.|:.||.:|||||||||:|::||||||||||||||||||
BPUM_3054___g 151 DGRDVGQKTAKVYLKQLEEQIKEIGVGEVATLSGRYYSMDRDKRWDRVEK 200
BSNT_05131___ 201 AYRAMAYGEGPSYRSALDVVDDSYANGIYDEFVIPSVITKENGEPVAKIQ 250
|||||||||||||::..|||||||.||||||||||||||:||||||||:.
BPUM_3054___g 201 AYRAMAYGEGPSYQNIYDVVDDSYENGIYDEFVIPSVITRENGEPVAKVN 250
BSNT_05131___ 251 DGDSVIFYNFRPDRAIQISNTFTNKDFRDFDRGENYPKNLYFVCLTHFSE 300
||||||||||||||||||||||||:|||.|||||.:||||:|||.|||||
BPUM_3054___g 251 DGDSVIFYNFRPDRAIQISNTFTNEDFRSFDRGEAHPKNLHFVCFTHFSE 300
BSNT_05131___ 301 TVDGYVAFKPINLDNTVGEVLSQHGLKQLRIAETEKYPHVTFFMSGGREA 350
||||||||||:||||||||||:|:|||||||||||||||||||||||||.
BPUM_3054___g 301 TVDGYVAFKPVNLDNTVGEVLAQNGLKQLRIAETEKYPHVTFFMSGGREE 350
BSNT_05131___ 351 EFPGEERILINSPKVATYDLKPEMSAYEVKDALVKEIEADKHDAIILNFA 400
|||||:|||||||.||||||||||||||||||||.:|.||||||||||||
BPUM_3054___g 351 EFPGEDRILINSPDVATYDLKPEMSAYEVKDALVADINADKHDAIILNFA 400
BSNT_05131___ 401 NPDMVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADI 450
||||||||||:|||||||||||||||.||||||||||||||||||||||:
BPUM_3054___g 401 NPDMVGHSGMLEPTIKAIEAVDECLGAVVDAILAKGGHAIITADHGNADV 450
BSNT_05131___ 451 LITESGEPHTAHTTNPVPVIVTKEGITLREGGILGDLAPTLLDLLGVEKP 500
||||.|:||||||||||||||||:|.||||||||.||:||||||||||||
BPUM_3054___g 451 LITEEGKPHTAHTTNPVPVIVTKKGATLREGGILADLSPTLLDLLGVEKP 500
BSNT_05131___ 501 KEMTGTSLIQK 511
|||||||||||
BPUM_3054___g 501 KEMTGTSLIQK 511
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