Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05193 and BPUM_3083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence pep-align/BSNT_05193___yveK.1.24716.seq
# -bsequence pep-align/BPUM_3083.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05193___yveK-BPUM_3083.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05193___yveK-BPUM_3083.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05193___yveK
# 2: BPUM_3083
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 104/243 (42.8%)
# Similarity: 162/243 (66.7%)
# Gaps: 9/243 ( 3.7%)
# Score: 538.0
#
#
#=======================================
BSNT_05193___ 1 MNENMSFKELYAIVRHRFVLILLITIGVTLIMGFVQFKVISPTYQASTQV 50
||||:.||:|:::::.:..|::||.:.||.|..:.||.|.:|.|||:||:
BPUM_3083 1 MNENIGFKQLFSVIKEKMALLILIVLIVTGISAYYQFYVSTPVYQATTQI 50
BSNT_05193___ 51 LVHESDGEENSNLSDIQRNLQYSSTFQSIMKSTALMEEVKAELHLSESAS 100
|||:...:..:||:|||.||||:.|||.::||..::|:||..|:|:|||.
BPUM_3083 51 LVHKRSNDAQANLNDIQMNLQYTRTFQVLLKSPIVIEKVKETLNLTESAE 100
BSNT_05193___ 101 SLKGKVVTSSENESEIINVAVQDHDPAKAAEIANTLVNKFEKEVDERMNV 150
.||.|:.||:|||||:||::|||.|.|||..||||.....::|:.:.||:
BPUM_3083 101 GLKHKIATSTENESEVINISVQDEDRAKAVAIANTATEVLQEEIKKTMNM 150
BSNT_05193___ 151 QGVHILSEAKASESPMIKPARLRNMVMAFGAAVMGGITLAFFLHFLDDTC 200
..:::|||||.|.:.::...:..::|:|.||:::||:||.|.::.||||.
BPUM_3083 151 DRINVLSEAKLSNTILMNSRKFVHIVLALGASLLGGVTLIFLMNLLDDTV 200
BSNT_05193___ 201 KSARQLSERTGLPCLGSVPDVHKGR-----NRGIKHFGE---- 234
|...|:.|..|||.||||..:...| .:.:...|:
BPUM_3083 201 KRTHQIREEIGLPSLGSVYQMQADRRAKKDKQSVITGGQNIDL 243
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