Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05323 and BPUM_3133

See DNA alignment / Visit BSNT_05323 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_05323.1.24716.seq
#    -bsequence pep-align/BPUM_3133.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05323-BPUM_3133.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05323-BPUM_3133.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05323
# 2: BPUM_3133
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:      78/172 (45.3%)
# Similarity:    86/172 (50.0%)
# Gaps:          69/172 (40.1%)
# Score: 405.5
# 
#
#=======================================

BSNT_05323         1 MRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLY     50
                     ||||||:||.|.|||..||:||||.|||||||.|||||||||:|||||:|
BPUM_3133          1 MRKTDRYPVKGVNSLRQVYRTVPFFKVVKNFIFIQIARYTPFMGMKNWIY     50

BSNT_05323        51 RTFLRMKVGNQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEY---     97
                     |||||||||..|:||||||.|:||||||.||.|::||||||||.|||   
BPUM_3133         51 RTFLRMKVGEDTAFALMVMVDLMFPEKIKVGRNSVIGYNTTILTHEYLIK    100

BSNT_05323        98 ---SGSAQF-----------------------------------------    103
                        .|....                                         
BPUM_3133        101 EYRLGEVYIGDEVLIGANSTILPGVTIGDGAIVSAGTLVHKDVPAGSFVG    150

BSNT_05323       103 ----------------------    103
                                           
BPUM_3133        151 GNPMRMIYTKEEMKVRQSKSAE    172


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