Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05374 and BPUM_3182

See DNA alignment / Visit BSNT_05374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05374___fliT.1.24716.seq
#    -bsequence pep-align/BPUM_3182___fliT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05374___fliT-BPUM_3182___fliT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05374___fliT-BPUM_3182___fliT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05374___fliT
# 2: BPUM_3182___fliT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      39/113 (34.5%)
# Similarity:    74/113 (65.5%)
# Gaps:           0/113 ( 0.0%)
# Score: 221.0
# 
#
#=======================================

BSNT_05374___      1 MNNIDQLYTETKSMLSHIQNTPESDELLKQIEDFVAKRSELIQEISLPLS     50
                     |:.:|||:.:|..|.:.|...|:||.|::..:.|:.:|.||:::|...|:
BPUM_3182___f      1 MSIVDQLHDQTLKMAAEITANPQSDTLVEDFDAFLIERDELMRDIQHELT     50

BSNT_05374___     51 EEERKQMKLVLTWDQLIVKEMERLKQSIAAELQQMKRKRVMHTTYLNPYN    100
                     ::|::::|.::..||.:.|::..::..|.|::|.:::|:.....|.|||.
BPUM_3182___f     51 DQEKEKIKEIIQTDQQMAKQLTVIQNGIKADIQAIQKKKTKQLNYQNPYQ    100

BSNT_05374___    101 NITIDGTYYDKRK    113
                     .:|.||.||||||
BPUM_3182___f    101 PMTSDGVYYDKRK    113


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