Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05384 and BPUM_3189

See DNA alignment / Visit BSNT_05384 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_05384___flgL.1.24716.seq
#    -bsequence pep-align/BPUM_3189___flgL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05384___flgL-BPUM_3189___flgL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05384___flgL-BPUM_3189___flgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05384___flgL
# 2: BPUM_3189___flgL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     146/303 (48.2%)
# Similarity:   214/303 (70.6%)
# Gaps:           5/303 ( 1.7%)
# Score: 757.0
# 
#
#=======================================

BSNT_05384___      1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSL     50
                     ||||||||.|||||.|..||.||.|:..|..:|::.:|.|||||.|:|||
BPUM_3189___f      1 MRVTQGMISQNSLRNISKSYEKLSKINEQAQTGRRFTKTSDDPVAAVKSL     50

BSNT_05384___     51 KYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQND    100
                     :|:|.:.:.:||::|.::|..|::.:||::||.|||:|.||:..::|.|.
BPUM_3189___f     51 QYSTAMFRNEQYQNNLNEAQNWIDTSETSVTEIIDIMSNVRDKVLDAANG    100

BSNT_05384___    101 TNGEAERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGD    150
                     |....:..|||||:.|:|:|:::..|||:.|:::|||||::..||.:|.|
BPUM_3189___f    101 TKQPEDLAAIGVEIGQMKKQIIDAMNTQMLGKFVFNGTNTNVKPVVENAD    150

BSNT_05384___    151 GTYTI-----SDTADVVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEML    195
                     ||:|.     :|...|..|||:.::|.|||:|.|||||.|.|||||.|||
BPUM_3189___f    151 GTFTFNFENYTDANSVKSNISDGITLNVNSNPISAFGGQSASGQNVIEML    200

BSNT_05384___    196 DSFEKALNSGSLDGMDNVLDDIDHFSDGMSAERSDLGARYNRLELVNTRL    245
                     ...|.:|.:|:....|:.|..||.|.:.|||||||||||.||::||.:||
BPUM_3189___f    201 TDLENSLKNGTFANSDDALGSIDQFKEVMSAERSDLGARSNRVDLVGSRL    250

BSNT_05384___    246 SAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLID    295
                     ::|.:......|:|||||.|:.|.:.:.|::|:||.||..|:::||:|:|
BPUM_3189___f    251 TSQFQVLKDAKSNNEDVESEKAILDLLQQETVNRAALATTAKVIQPSLVD    300

BSNT_05384___    296 FLK    298
                     ||:
BPUM_3189___f    301 FLR    303


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