Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04492 and BPUM_3207

See DNA alignment / Visit BSNT_04492 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_04492___ytcB.1.24716.seq
#    -bsequence pep-align/BPUM_3207___galE2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04492___ytcB-BPUM_3207___galE2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04492___ytcB-BPUM_3207___galE2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04492___ytcB
# 2: BPUM_3207___galE2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:      97/329 (29.5%)
# Similarity:   166/329 (50.5%)
# Gaps:          33/329 (10.0%)
# Score: 335.0
# 
#
#=======================================

BSNT_04492___      1 -MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKN     49
                      .|:||||.:||||||..|||: :|::.||.:|:|     .:.:.:|:.:
BPUM_3207___g      1 MKKVLVTGGSGFIGSHTVEELI-NKEYEVIVLDNF-----STGRKENIAH     44

BSNT_04492___     50 LLQEKRFTFIKENLLTADLAPLLEGV--DVIFHLAAIPGVRSSWGNHFHP     97
                     |    ....|:|::...::..:::.:  |.|.||||...|..|..::.:.
BPUM_3207___g     45 L----SVPCIEEDVTKPEVVEIIKKIAPDYIIHLAAQVSVAVSVNDYIYD     90

BSNT_04492___     98 YAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEK-QGKVSENTSLSPL    146
                     ... ||:....:::|..|..::..||||:::|||:. ...|.....|.|.
BPUM_3207___g     91 QEV-NIKGSLHVIKAASEAGVKKVVFASSAAVYGDPVYLPVDTAHQLKPG    139

BSNT_04492___    147 SPYGVTKLTGEKLCHVYQQSFGIPIVILRFFTVYGPRQRPDMAFHRLIKQ    196
                     ||||::|||.|:...:.:..:.:...|||:..||||||  |......:..
BPUM_3207___g    140 SPYGLSKLTVERYLEMAKTLYDVDYCILRYSNVYGPRQ--DALGEGGVVS    187

BSNT_04492___    197 HLQQK------PLTIFGDGQQSRDFTYIGDCVKGITAVLGKPRLIGETVN    240
                     ....|      |. |||||:|:|||.|:||......|.|.....:  .:|
BPUM_3207___g    188 IFSDKFAKVEAPF-IFGDGEQTRDFIYVGDLAAANVAALTAQSNV--CLN    234

BSNT_04492___    241 IGGAERASVIKVVSLIEDISGRKATLHFSDKIAGEPRNTWADISKAKQLL    290
                     |...:..:|.::...::.::|......:..:.||:..::.....:.||:|
BPUM_3207___g    235 ISCGDSITVNELFQTMKRVTGSHLEPIYKAQRAGDIVHSTLSNEETKQVL    284

BSNT_04492___    291 HYNPATSLKDGLTNEITYLSSLYQGE---    316
                     .:.|..||::||...|:|    |:.|   
BPUM_3207___g    285 SWEPVVSLQEGLARTISY----YEQEVKA    309


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