Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05418 and BPUM_3208
See
DNA alignment /
Visit
BSNT_05418 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_05418___tuaD.1.24716.seq
# -bsequence pep-align/BPUM_3208___tuaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05418___tuaD-BPUM_3208___tuaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05418___tuaD-BPUM_3208___tuaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05418___tuaD
# 2: BPUM_3208___tuaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 312/444 (70.3%)
# Similarity: 382/444 (86.0%)
# Gaps: 0/444 ( 0.0%)
# Score: 1667.0
#
#
#=======================================
BSNT_05418___ 1 MLKRIAVIGTGYVGLVSGTCFAEVGNSVVCCDIDAEKIRGLLAGVMPIYE 50
|||:||||||||||||||||||::||.|:|||||..||..|.:||:||||
BPUM_3208___t 1 MLKKIAVIGTGYVGLVSGTCFADIGNRVICCDIDESKINSLKSGVVPIYE 50
BSNT_05418___ 51 NGLKELVDKNVNENRLFFSTDIPKAIEEAEIIYIAVGTPMSETGEADLTF 100
.|||||::||..|.||||:|:||.||.|::||||||||||:..||||||:
BPUM_3208___t 51 PGLKELIEKNTEEGRLFFTTNIPAAIRESDIIYIAVGTPMTAQGEADLTY 100
BSNT_05418___ 101 VKSVAEMIGKHLNGYKVIVNKSTVPVGTGKLIQGIIQRISKGEVPFDVVS 150
||:||:.||:||||||:||||||||||||:|:|.|:::.|:.:.||||||
BPUM_3208___t 101 VKAVAQTIGEHLNGYKIIVNKSTVPVGTGRLVQAIVEKASRSKYPFDVVS 150
BSNT_05418___ 151 NPEFLREGTAIYDTMNMERAVIGATSERAAAIIEELHKPFQTKIVKSNLE 200
||||||||:||.|||||||.|||:||..|:.||:.||:||||.:|::|||
BPUM_3208___t 151 NPEFLREGSAIKDTMNMERVVIGSTSSHASEIIKTLHEPFQTVVVETNLE 200
BSNT_05418___ 201 SAEMIKYAANAFLATKISFINDIANICERVGADVSKVSEGVGLDSRIGNK 250
|||||||||||.|||||||||||||||:||||||.|||||||||||||.|
BPUM_3208___t 201 SAEMIKYAANAMLATKISFINDIANICDRVGADVEKVSEGVGLDSRIGQK 250
BSNT_05418___ 251 FLKAGIGFGGSCFPKDTMALLHIAKSAGYPFKMIEAVIETNQKQRAHIVQ 300
|||||:|||||||||||.|||.||::.||.||:||:|:|||..|||::|:
BPUM_3208___t 251 FLKAGVGFGGSCFPKDTKALLKIAETVGYRFKLIESVVETNTHQRAYLVK 300
BSNT_05418___ 301 KLLDVFGDLNGKTISILGLAFKPNTNDMRSAPSLDVIPTLRSLGAKVKAF 350
||:||:||:.|||||:|||||||||||:||:|:||:||.|:.|||.|||:
BPUM_3208___t 301 KLMDVYGDIKGKTISVLGLAFKPNTNDLRSSPALDIIPMLQDLGAYVKAY 350
BSNT_05418___ 351 DPIAVPEAEKILGDQAVYSEDLYETIQDTDACVILTEWHEIQNMDITKLK 400
||||..||:||||:|.::|::||:||:.:|||.|||||.|:..||:.|::
BPUM_3208___t 351 DPIAHLEAKKILGNQTIFSDNLYQTIEHSDACFILTEWEEVLKMDMEKVR 400
BSNT_05418___ 401 AALKNPVLIDGRNIFEVEKMRNEGMIYHSIGRPEVQVEGILTNV 444
..|:.||:||||||||.|:||..|.||||||||.||...:|...
BPUM_3208___t 401 RLLQRPVIIDGRNIFEPEQMRKNGFIYHSIGRPHVQDVKMLLEA 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.