Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05428 and BPUM_3215
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence pep-align/BSNT_05428___lytB.1.24716.seq
# -bsequence pep-align/BPUM_3215___lytB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05428___lytB-BPUM_3215___lytB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05428___lytB-BPUM_3215___lytB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05428___lytB
# 2: BPUM_3215___lytB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity: 407/717 (56.8%)
# Similarity: 524/717 (73.1%)
# Gaps: 18/717 ( 2.5%)
# Score: 2058.0
#
#
#=======================================
BSNT_05428___ 1 MKKMKLLVLSSVTAAALMFTQSAQAADKTISVKLSNYLGNKSSVDIDITG 50
|||:. |..::.....|:|..:..||..:||||||||:|||::.:|..:|
BPUM_3215___l 1 MKKLS-LTFTTFILLLLVFMPNDAAAASSISVKLSNYVGNKNNFNISSSG 49
BSNT_05428___ 51 LYEIPGSGISATERYGGATRFDVANNVASAGWTNPSTVVIVNRDAFADAL 100
||::.|:.:|:..||.|..|::|||::|||||.||||:|||||||||||:
BPUM_3215___l 50 LYKVTGTNVSSVARYDGKNRYEVANSIASAGWKNPSTIVIVNRDAFADAI 99
BSNT_05428___ 101 SATPLAKKYDAPILLTDAGTLTAKTETQIAKMKPDNILIIGGTTSVSKNV 150
||||||.|.:||||.|:|..||..||.||.||.||||||||||||||...
BPUM_3215___l 100 SATPLAYKLNAPILYTNAEKLTKTTEKQIKKMNPDNILIIGGTTSVSSAT 149
BSNT_05428___ 151 ENTLKKYGAIVRIGGANRYDVSKNIASRMGSYSQAIVATGLVFSDALSIA 200
|..|||||.|.||.|.:||.||:|||..||:||:||||||.:|:|:.|:.
BPUM_3215___l 150 EKALKKYGKIKRISGKSRYAVSQNIAKEMGNYSEAIVATGSIFTDSASVT 199
BSNT_05428___ 201 PYAAMNGYPILLSGNNTIRSDYNIPSKVTIVGGPLSVSTSVENTLKKKAA 250
||||.|||||||:..:::.: |.:|.||.|:||..|||..||:.:||.:.
BPUM_3215___l 200 PYAARNGYPILLTKKDSLPT-YKLPKKVVIIGGEKSVSKKVESQIKKTST 248
BSNT_05428___ 251 VTRIGGANRYEVSANIVNALNMNASKVFMSNGMTFADALAGSVLAAKQKH 300
|.|||||||||||||||..|||||:|::::||..|.||:..|:||||...
BPUM_3215___l 249 VKRIGGANRYEVSANIVTGLNMNANKLYLANGSIFTDAITFSLLAAKNNS 298
BSNT_05428___ 301 PLLLVQSGSLPPPVADVVAKKGTQSFALLGGTASITDSLKNSLAD---MI 347
|::||:..||..||..:|.|:||.||.|.||..||:.||::.|:. :.
BPUM_3215___l 299 PMVLVKENSLTSPVTSIVKKQGTYSFQLSGGVKSISASLQSKLSKEFYLK 348
BSNT_05428___ 348 TGNGYSVNLSGGKLVLNKNNKAVKTFETSFTASPKKYSTSNSISINGRPY 397
....|.:|:|.||:.: |.:|||.:|....|:||||:|.|.:.|:.|
BPUM_3215___l 349 NNKDYQLNVSNGKISI----KGIKTFGSSVRVVPEKYSTTNVIRVAGKAY 394
BSNT_05428___ 398 LGNMKFTIESSKYIRPINENIPFEDYLKGVVPHEMPASWQTEALKAQAVA 447
||||.|.:||. ||||.|||||||||||||||:||||||..|||||||||
BPUM_3215___l 395 LGNMNFAVESG-YIRPTNENIPFEDYLKGVVPNEMPASWHVEALKAQAVA 443
BSNT_05428___ 448 ARTYSVGSAGKVVADTQSFQVYGGYDWNSKTSSVVNSTKGQVLKYNGNLI 497
||||||.|.||||.||.:|||||||:|::.::..|::|||:|||||.:||
BPUM_3215___l 444 ARTYSVSSIGKVVPDTTAFQVYGGYNWSTNSTKAVDATKGKVLKYNNSLI 493
BSNT_05428___ 498 SAVYSSSNGGYTEASAEVWGGNVPYLIAKADTYDPKTSWSISLNKTQINT 547
||.|.||||||||||.|||....|||:|||||.|||.:|::.|:|||::|
BPUM_3215___l 494 SATYYSSNGGYTEASEEVWSSAFPYLVAKADTKDPKNAWTLKLSKTQLST 543
BSNT_05428___ 548 SGLNLSSPSTWWNSTNETNSAYLSGLKSWFMTNKYPSAESIKITKISSLS 597
| |:.|||::||:.|.|||::.|:|||:|.:.||..||..|||..|||::
BPUM_3215___l 544 S-LSASSPASWWSKTAETNASQLNGLKNWILKNKETSASEIKIANISSVT 592
BSNT_05428___ 598 LSSAKTAGQRPKTAEVKFSYFVKEKSNGYVLSNGKLSEKTATISVTTTQL 647
. |.||.|||.|||.:|.||.:|.|:..|.:: |:||:|...|:.
BPUM_3215___l 593 F-SGKTKGQRAKTASLKVSYHLKNKTGSYSMN------KSATLSFKMTEF 635
BSNT_05428___ 648 RSMLGGMNMKSTYASLSNNTNAFILSGKGFGHGIGMSQYGANARAAAGHD 697
||:||..|:||||||:.||||.|.::|||:|||:|||||||..||.:|..
BPUM_3215___l 636 RSILGATNLKSTYASVKNNTNDFTITGKGYGHGVGMSQYGAKMRAESGST 685
BSNT_05428___ 698 YKKILSFYYPNTTLSSY 714
|..|||||||...|::.
BPUM_3215___l 686 YSSILSFYYPGAKLTTN 702
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