Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05486 and BPUM_3272

See DNA alignment / Visit BSNT_05486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_05486___alsD.1.24716.seq
#    -bsequence pep-align/BPUM_3272___alsD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05486___alsD-BPUM_3272___alsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05486___alsD-BPUM_3272___alsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05486___alsD
# 2: BPUM_3272___alsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     166/262 (63.4%)
# Similarity:   206/262 (78.6%)
# Gaps:          13/262 ( 5.0%)
# Score: 890.0
# 
#
#=======================================

BSNT_05486___      1 ------MKRESNIQVLRRGQKDQPVSQIYQVSTMTSLLDGVYDGDFELSE     44
                           |.::::   .|:..|.|   ::||||||||||:.||||||.||:
BPUM_3272___a      1 MGMMHPMNQQND---TRQHDKQQ---EVYQVSTMTSLLEAVYDGDFSLSQ     44

BSNT_05486___     45 IPKYGDFGIGTFNKLDGELIGFDGEFYRLRSDGTATPVQNGDRSPFCSFT     94
                     ||::|||||||||:||||||||||.|||||||||||||.:.|.|||||..
BPUM_3272___a     45 IPEHGDFGIGTFNQLDGELIGFDGAFYRLRSDGTATPVTDQDYSPFCSLA     94

BSNT_05486___     95 FFTPDMTHKIDAKMTREDFEKEINSMLPSRNLFYAIRIDGLFKKVQTRTV    144
                     ||..|:.|:|||.||.::.|:||:.:|||:|:||||||||.|||||||||
BPUM_3272___a     95 FFETDIVHRIDAAMTSKELEEEIDRILPSKNVFYAIRIDGTFKKVQTRTV    144

BSNT_05486___    145 ELQEKPYVPMVEAVKTQPIFNFDNVRGTIVGFLTPAYANGIAVSGYHLHF    194
                     |.|||||||||||||:||||:|::::|||.||.||.||:|||||||||||
BPUM_3272___a    145 EKQEKPYVPMVEAVKSQPIFDFEDIQGTIAGFRTPQYAHGIAVSGYHLHF    194

BSNT_05486___    195 IDEGRNSGGHVFDYVLEDCTVTISQKMNMNLRLPNTADFFNANLDNPDFA    244
                     ||:.|:.|||||||.::..|:.||||.:|||.||||.:||.|::|..|.|
BPUM_3272___a    195 IDDDRSVGGHVFDYTVDQVTIRISQKRHMNLHLPNTQEFFQADIDRADLA    244

BSNT_05486___    245 KDIETTEGSPE-    255
                     :.|...|.||: 
BPUM_3272___a    245 QQIANAESSPDQ    256


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