Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05546 and BPUM_3284

See DNA alignment / Visit BSNT_05546 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_05546___ywpF.1.24716.seq
#    -bsequence pep-align/BPUM_3284___ywpF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05546___ywpF-BPUM_3284___ywpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05546___ywpF-BPUM_3284___ywpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05546___ywpF
# 2: BPUM_3284___ywpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      76/137 (55.5%)
# Similarity:   100/137 (73.0%)
# Gaps:           2/137 ( 1.5%)
# Score: 383.0
# 
#
#=======================================

BSNT_05546___      1 MKTFKLVDLNVERVDKEEQSIEQFPLIDGLIINKEDGENHWLIEALVQKE     50
                     ||||:|:||.:| :|.::..:...||.||||||||||||||:||||:.|:
BPUM_3284___y      1 MKTFRLIDLKIE-LDPKQDKMSSIPLRDGLIINKEDGENHWMIEALIPKK     49

BSNT_05546___     51 HLSFFEQLLNSQSEAKVFVTITKKSNRPAQLTAAVKNIVKLEESIQVLLY    100
                     |...||.|....:|.|:.|||||::|||..|:..|||||.|||:|.|||.
BPUM_3284___y     50 HRQVFEVLFQQHTEVKILVTITKENNRPVHLSVQVKNIVALEENISVLLD     99

BSNT_05546___    101 GQMVT-RKQQGTETILESLVKEGYTGTKLIEAFKQKL    136
                     |:|:| |.:..||.:|:.|||||.:|.||::||||..
BPUM_3284___y    100 GKMITNRYRTETEEVLKDLVKEGLSGEKLLDAFKQNT    136


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