Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05555 and BPUM_3287
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence pep-align/BSNT_05555___rapD.1.24716.seq
# -bsequence pep-align/BPUM_3287___rapD1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05555___rapD-BPUM_3287___rapD1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05555___rapD-BPUM_3287___rapD1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05555___rapD
# 2: BPUM_3287___rapD1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 131/357 (36.7%)
# Similarity: 213/357 (59.7%)
# Gaps: 9/357 ( 2.5%)
# Score: 613.5
#
#
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BSNT_05555___ 1 MISKFI-EKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKL 49
..|| :|.:..:|..||:.:..|..:....:|..:.:|..||.|..:|
BPUM_3287___r 1 --MNFISDKSIKKLLHSWYTMLKHRHFSKAEEIKTTLLKHQRKISKKQEL 48
BSNT_05555___ 50 WMRYQLFQARHQLLFENQNGLDSLFDDLYGLEDKMDDELKYYLYFFSGLY 99
.:.|||...||||.......|:.:..:|...::.|::||.||.|||.|||
BPUM_3287___r 49 CLHYQLMLFRHQLWMNQTEDLEKMKHELMQHKEDMNEELAYYFYFFLGLY 98
BSNT_05555___ 100 EMVKTAPKHAVHHFKKAEQYLAAIQNTFEAADLYYQTAGAYYLMKSPPLS 149
|.:.:....|:::.:|||:.|:.:.:..|.|:.:::|:|.||..:...||
BPUM_3287___r 99 EALNSDQNDAIYYLEKAEERLSFLNDELEEAEFHFRTSGVYYNNRYSLLS 148
BSNT_05555___ 150 IQYVKKALHIYLHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIK 199
|::::||:.|:. :.|....:..||::|.:||.||::||:||.||.|||.
BPUM_3287___r 149 IRHIQKAMDIFA-KHGDDHSLYRCKIVLGLNYSDQKKYEEAEALFIEIID 197
BSNT_05555___ 200 KTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKNQEFEMNSPV 249
..:.:.|:.||...||:.||:::.:.:..:||.||:|.|:...:. .|..
BPUM_3287___r 198 YVKMIDDQELLGIVYYDAGFIQSRQNRHTKALEYFKKALRLPAYR-KSVH 246
BSNT_05555___ 250 SYLHCVYESVRALFKTGNITEAKAVLQKG-KE-LSEKVDIQTIYLKLKTL 297
||:.|:||:||:.:|.....|....:||| || ::.:.|| :.:|.:.|
BPUM_3287___r 247 SYVSCLYETVRSCYKENLTDEGMKYIQKGLKEAVASQFDI--LRIKFQIL 294
BSNT_05555___ 298 EALYTSVEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKA 347
..||:......||:...|..||:.|||:|||.||.|::::||||.|||:|
BPUM_3287___r 295 FLLYSQTSKADEQIARLVTCLERKEAWIDLEDLLADVSDFYKKKGDFERA 344
BSNT_05555___ 348 AFFIMRG 354
|||||||
BPUM_3287___r 345 AFFIMRG 351
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