Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05614 and BPUM_3320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_05614___spoIID.1.24716.seq
# -bsequence pep-align/BPUM_3320___spoIID.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05614___spoIID-BPUM_3320___spoIID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05614___spoIID-BPUM_3320___spoIID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05614___spoIID
# 2: BPUM_3320___spoIID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 226/344 (65.7%)
# Similarity: 271/344 (78.8%)
# Gaps: 4/344 ( 1.2%)
# Score: 1148.0
#
#
#=======================================
BSNT_05614___ 1 MKQFAITLSVLCALILLVPTLLVIP-FQHNKEAGASVESEKTAVSTKPAS 49
||....|::.:|.:||::|||||:| ||...||...|.:|.:| |...
BPUM_3320___s 1 MKPMIWTIAGICIIILMIPTLLVLPTFQGKPEASQHVSAEPSA---KKEV 47
BSNT_05614___ 50 KGAETLKASPVSIPVYRTANQSVENIPLEEYVIGVVASEMPATFKPEALK 99
||...||.|||:|||||:|:|.||||||||||||||||||||.|:.||||
BPUM_3320___s 48 KGTVKLKQSPVAIPVYRSAHQQVENIPLEEYVIGVVASEMPADFEMEALK 97
BSNT_05614___ 100 AQALAARTFIVRLMVSNSAVEAPKGSLVDDTQMFQVYKSKAELKKQWGTS 149
||||||||:|||.|:.:..|::||||||||||||||||:|.||||.||.:
BPUM_3320___s 98 AQALAARTYIVRQMIIDKTVKSPKGSLVDDTQMFQVYKNKQELKKIWGKA 147
BSNT_05614___ 150 YETKLKKITDAVTSTQGKILTYNNQPIEASFFSTSNGYTENAEAYWTSAI 199
|..||||:|:||.|||||:|||:.:||:|||||||||.||||||||.:.|
BPUM_3320___s 148 YNWKLKKVTEAVASTQGKVLTYDEKPIDASFFSTSNGKTENAEAYWKNEI 197
BSNT_05614___ 200 PYLKSVKSPWDKKSPKYKATKTFTAAEFQQKLGVKLDGSSAVGKITGETP 249
||||||:|.||:||||::..||...:||||||||.|...:.||:|...||
BPUM_3320___s 198 PYLKSVESKWDEKSPKFQNKKTIPVSEFQQKLGVTLTQQAQVGQIVERTP 247
BSNT_05614___ 250 GHQVATAVINGKTLKGRDIREKLGLNSADFEWKRNGDTITVTTRGFGHGV 299
|:|||..|||||||.||||||.|||:||||.|:|.|..|.:||:|:||||
BPUM_3320___s 248 GNQVAKVVINGKTLTGRDIRESLGLHSADFTWERQGQQIIITTKGYGHGV 297
BSNT_05614___ 300 GMSQYGANFMAKEGKTVDDIVKYYYQGTQISEADAFLNKYMAKK 343
|||||||::||:.||.||.|||:||:|.||..||.|||.|||||
BPUM_3320___s 298 GMSQYGAHYMAQSGKKVDAIVKHYYKGIQIESADRFLNTYMAKK 341
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