Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05638 and BPUM_3336
See
DNA alignment /
Visit
BSNT_05638 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05638___ywlG.1.24716.seq
# -bsequence pep-align/BPUM_3336___ywlG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05638___ywlG-BPUM_3336___ywlG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05638___ywlG-BPUM_3336___ywlG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05638___ywlG
# 2: BPUM_3336___ywlG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 116/180 (64.4%)
# Similarity: 135/180 (75.0%)
# Gaps: 1/180 ( 0.6%)
# Score: 565.0
#
#
#=======================================
BSNT_05638___ 1 MNELKQTWKTMLSEFQDQAELKQDQLFVLGCSTSEVAGSRIGTSGSVDIA 50
|| :.|.|..||.||....||:...:.|:|||||||||..|||:||..||
BPUM_3336___y 1 MN-IGQDWLGMLKEFHQMVELRAGHILVIGCSTSEVAGEHIGTAGSEQIA 49
BSNT_05638___ 51 ESIYSGLAELREKTGIHLAFQCCEHLNRALVVEAETAKLFRLPTVSAVPV 100
.|||..|.:||.:|||.||||||||||||||||.|.|....|..|.||||
BPUM_3336___y 50 VSIYQELDQLRRETGIELAFQCCEHLNRALVVEEEVAFRLNLEIVEAVPV 99
BSNT_05638___ 101 PKAGGAMASYAFKQMKSPVLVETIQADAGIDIGDTFIGMHLKPVAVPVRV 150
.||||:||::|::.|:.|||||:|:|.|||||||||||||||.||||||:
BPUM_3336___y 100 RKAGGSMAAHAYQHMEHPVLVESIEAHAGIDIGDTFIGMHLKRVAVPVRL 149
BSNT_05638___ 151 SQNSLGSAHVTLARTRPKLIGGVRAVYECE 180
|::.||.||||.|:||||||||.||||...
BPUM_3336___y 150 SRHQLGHAHVTFAKTRPKLIGGERAVYTRS 179
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.