Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05670 and BPUM_3356
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_05670___ywjH.1.24716.seq
# -bsequence pep-align/BPUM_3356___ywjH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05670___ywjH-BPUM_3356___ywjH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05670___ywjH-BPUM_3356___ywjH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05670___ywjH
# 2: BPUM_3356___ywjH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 195/212 (92.0%)
# Similarity: 203/212 (95.8%)
# Gaps: 0/212 ( 0.0%)
# Score: 972.0
#
#
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BSNT_05670___ 1 MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDV 50
||||||||||.:|:||:||||||||||||||||||.:|||||||||||||
BPUM_3356___y 1 MLFFVDTANIADIKEAHELGILAGVTTNPSLVAKEKDVSFHDRLREITDV 50
BSNT_05670___ 51 VKGSVSAEVISLKAEEMIEEGKELAKIAPNITVKIPMTSDGLKAVRALTD 100
|.|||||||||||||||||||||||.||||||||||||:||||||:||||
BPUM_3356___y 51 VSGSVSAEVISLKAEEMIEEGKELAAIAPNITVKIPMTTDGLKAVKALTD 100
BSNT_05670___ 101 LGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQ 150
|||||||||||:||||||||||||||||||||||||||.||||||||||.
BPUM_3356___y 101 LGIKTNVTLIFSANQALLAARAGATYVSPFLGRLDDIGQNGLDLISEVKT 150
BSNT_05670___ 151 IFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTD 200
|||:||||||||||||||||||||||||||||||||||||..||||||||
BPUM_3356___y 151 IFDVHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIKQLTKHPLTD 200
BSNT_05670___ 201 KGIEQFLADWNK 212
.|||||||||||
BPUM_3356___y 201 AGIEQFLADWNK 212
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