Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05681 and BPUM_3374
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_05681___ywjF.1.24716.seq
# -bsequence pep-align/BPUM_3374___ywjF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05681___ywjF-BPUM_3374___ywjF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05681___ywjF-BPUM_3374___ywjF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05681___ywjF
# 2: BPUM_3374___ywjF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 707
# Identity: 552/707 (78.1%)
# Similarity: 620/707 (87.7%)
# Gaps: 6/707 ( 0.8%)
# Score: 2999.5
#
#
#=======================================
BSNT_05681___ 1 MSGFLIANTLLFLIVTAYAVYLFVYLVKTRLAYIKLGQKEQFDQRFKERL 50
|:..||.|.:.|..|||||||||:||::||.|||:||:||:|.|..|:||
BPUM_3374___y 1 MNSLLIMNMIAFAAVTAYAVYLFIYLIRTRAAYIRLGKKEEFQQDMKKRL 50
BSNT_05681___ 51 HDIWVNVFGQKKLLKDKKSGIIHVMFFYGFILVQFGAIDFIIKGLAPGRN 100
..:|||||||||||||||||||||:||||||||||||:|||:|||.|...
BPUM_3374___y 51 ERVWVNVFGQKKLLKDKKSGIIHVLFFYGFILVQFGALDFIMKGLVPDSG 100
BSNT_05681___ 101 LPLGPVYPAFTFFQEIVTFLILIAVGWAFYRRYIEKLVRLKRGFKAGLVL 150
|||||:|..||||||:||.|||:||.|||:|||:|||||||||||:||||
BPUM_3374___y 101 LPLGPLYGVFTFFQEVVTLLILVAVVWAFHRRYVEKLVRLKRGFKSGLVL 150
BSNT_05681___ 151 IFIGGLMLTVLLGNGMNLIWHEHGLSWSEPIASGIAFMLSGVGKTGAAVI 200
:||||||||||||||||:|||.|.||.:|||||.|||:|.|:....|.|:
BPUM_3374___y 151 LFIGGLMLTVLLGNGMNIIWHGHSLSPTEPIASSIAFLLGGISPLAATVV 200
BSNT_05681___ 201 FYIAWWIHLLFLLSFLVYVPQSKHAHLIAGPANVFFNRMESAGKLEKIDF 250
||:|||:|||.||:|||||||||||||||||.|||.:|::..|||:||||
BPUM_3374___y 201 FYVAWWVHLLILLTFLVYVPQSKHAHLIAGPVNVFASRLDPPGKLQKIDF 250
BSNT_05681___ 251 TDETKESYGAGKIEDFRQSQLLDLYACVECGRCTNMCPATGTGKMLSPMD 300
.|||:|::|.|||||||||||:||||||||||||||||||||||||||||
BPUM_3374___y 251 EDETQETFGVGKIEDFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMD 300
BSNT_05681___ 301 LILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAAASAGSGSQEAAA 350
||||||||||.||||:||::||||..|||.|.|||||..:.|:|::|:||
BPUM_3374___y 301 LILRLRDHLTNKGAAITSKTPWVPQLAFRQTTGNQLALQARGAGAEESAA 350
BSNT_05681___ 351 ALDYNPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL 400
:..|:|||||:||||||||||||||||||||||||||||||||:||||||
BPUM_3374___y 351 SSMYHPSLIGEVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDMRRYLVL 400
BSNT_05681___ 401 TEGKMDSDAQRAMTSIERQGNPWGLNRKERENWRDEAPDAEIPTVKEMKK 450
||||||:|||||||||||||||||||||||||||:...|..:|||||:||
BPUM_3374___y 401 TEGKMDADAQRAMTSIERQGNPWGLNRKERENWRELREDVHVPTVKELKK 450
BSNT_05681___ 451 EGKEFEYLFWVGSMGSYDNRSQKIAISFAKLLNHAGVSFAILGNKEKNSG 500
..:.|:|||||||||:|||||||||::||||||.||||||||||||||||
BPUM_3374___y 451 ADQTFDYLFWVGSMGAYDNRSQKIALAFAKLLNEAGVSFAILGNKEKNSG 500
BSNT_05681___ 501 DTPRRLGNEFLFQELAEKNISEFEKNDVKKIVTIDPHAYNLFKNEYPDFG 550
||||||||||||||||.|||.||:||:|.|||||||||||||||||||||
BPUM_3374___y 501 DTPRRLGNEFLFQELATKNIEEFQKNNVTKIVTIDPHAYNLFKNEYPDFG 550
BSNT_05681___ 551 FEGEVYHHTEVLAELVKNGKLKPQHPLHETITFHDSCYLGRYNEVYDPPR 600
.|.|||||||:||||||.|||.|.|.::|.||||||||||||||||||||
BPUM_3374___y 551 LEAEVYHHTELLAELVKEGKLAPVHEVNEVITFHDSCYLGRYNEVYDPPR 600
BSNT_05681___ 601 EILKGIPGVQLVEMERNRETGMCCGAGGGLMWMEEETGNRINVARTEQAL 650
:|||.||||.|.||||:|||||||||||||||||||||.|||.|||||||
BPUM_3374___y 601 DILKAIPGVTLREMERHRETGMCCGAGGGLMWMEEETGTRINTARTEQAL 650
BSNT_05681___ 651 AVNPSVISSGCPYCLTMLGDGTKAKEAEDQVKTYDVVELLAQSVLGADLK 700
.|.||:||||||||||||||||||||.|:||.|:||.|||.:||.|.
BPUM_3374___y 651 QVQPSIISSGCPYCLTMLGDGTKAKEVEEQVGTFDVAELLEKSVFGE--- 697
BSNT_05681___ 701 MGEKQ-- 705
.|||
BPUM_3374___y 698 -AEKQVS 703
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