Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05682 and BPUM_3375
See
DNA alignment /
Visit
BSNT_05682 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence pep-align/BSNT_05682___ywjE.1.24716.seq
# -bsequence pep-align/BPUM_3375___ywjE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05682___ywjE-BPUM_3375___ywjE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05682___ywjE-BPUM_3375___ywjE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05682___ywjE
# 2: BPUM_3375___ywjE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 197/399 (49.4%)
# Similarity: 279/399 (69.9%)
# Gaps: 2/399 ( 0.5%)
# Score: 1068.0
#
#
#=======================================
BSNT_05682___ 1 MKVFIVIMIIVVIFFALILLDIFMGRAGYRKKAYEPVFSKKKSDIELIHC 50
.:.::|::::::...|||||::||:..:..:|:|..|.:...|....|.
BPUM_3375___y 1 -MIALIILLVLIVIVCLILLDLYMGKKYFSTRAFERSFDQTSGDAVFYHD 49
BSNT_05682___ 51 GADLVERMMKDIRQAASSVHMMFFIMKNDEVSHNMYTLLKTKAQAGVSVY 100
|..|..:::.||:.|:||:||||||:|||::...:...|||||:.||||:
BPUM_3375___y 50 GEPLFNQLLTDIQHASSSIHMMFFIVKNDKIGQRVLQALKTKAKQGVSVF 99
BSNT_05682___ 101 LLLDWAGCRAIKKTALQTMKNAGVHVHVMNRPRFPFFFFHMQKRNHRKIT 150
||.|..|.....:.::..::.:|:..:.:|:|||||..:.:..|||||||
BPUM_3375___y 100 LLTDRLGSYPFDQKSIDMLEKSGIQFYFLNKPRFPFLIYRLNMRNHRKIT 149
BSNT_05682___ 151 VIDGKIGYIGGFNIAEEYLGKKAKFGNWEDYHLRMMGEGVHDLQTLFASD 200
||||||||||||||.:||:|||.:||.|:||||||.|:.|.|||.:|.:|
BPUM_3375___y 150 VIDGKIGYIGGFNIGDEYVGKKGRFGIWKDYHLRMTGQVVADLQHVFLND 199
BSNT_05682___ 201 LKRNTGI-ELGSDVWPKLQQGAISHKIYATDGYSLENIYLANIAQAKNRL 249
|.|.:|| :|..||:|.|:||.:.....||.|:|||.::|.:|.||:.::
BPUM_3375___y 200 LYRTSGIHQLQYDVFPALEQGTLQCTTRATAGFSLEALFLKDIQQARKQI 249
BSNT_05682___ 250 TVCTPYYIPSKPLQEALINARKNGVSVRIIVPMKSDHPLVREAAFTYYSE 299
.:||||:|||.||..||::|||.||:|.||:|||:|||||:||.|.|..:
BPUM_3375___y 250 IICTPYFIPSAPLLNALLDARKRGVTVEIIIPMKADHPLVKEAGFHYLKD 299
BSNT_05682___ 300 LLDAGCLIYRYYQGFYHVKALIIDDHLSIIGTANFDKRSLFLNEEVNVEI 349
|:.:|||:||:|:||||.||::||...|||.|||||||||||||||:|.|
BPUM_3375___y 300 LIASGCLVYRFYKGFYHAKAILIDQRRSIISTANFDKRSLFLNEEVDVAI 349
BSNT_05682___ 350 DDEAFTSEVYATIEEDMKKSERLTMEDFSKRTFRQRPAEWLGRALSYFL 398
||..||:.|...|.|.::.||.:|.|..::|....|..||.....||||
BPUM_3375___y 350 DDVDFTAHVEGKIREHIEVSELMTEEKLAQRPLLSRMLEWAAAMFSYFL 398
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.