Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05732 and BPUM_3386

See DNA alignment / Visit BSNT_05732 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_05732___speB.1.24716.seq
#    -bsequence pep-align/BPUM_3386___speB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05732___speB-BPUM_3386___speB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05732___speB-BPUM_3386___speB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05732___speB
# 2: BPUM_3386___speB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     251/290 (86.6%)
# Similarity:   270/290 (93.1%)
# Gaps:           0/290 ( 0.0%)
# Score: 1335.0
# 
#
#=======================================

BSNT_05732___      1 MRFDEAYSGKVFIASRPEWEEADAILYGMPMDWTVSYRPGSRFGPSRIRE     50
                     |||||||||||||.|.|.||:|..|||||||||||||||||||||:||||
BPUM_3386___s      1 MRFDEAYSGKVFIGSHPTWEDAKVILYGMPMDWTVSYRPGSRFGPNRIRE     50

BSNT_05732___     51 VSIGLEEYSPYLDRDLADLNFFDAGDIPLPFGNPQRSLDMIEEYVDSILE    100
                     ||||||||||||||:|.::.|||||||||||||.|:|||:||||||||||
BPUM_3386___s     51 VSIGLEEYSPYLDRELHEVPFFDAGDIPLPFGNAQKSLDLIEEYVDSILE    100

BSNT_05732___    101 KGKFPMGMGGEHLVSWPVIKAMYKKYPDLAIIHFDAHTDLRVDYEGEPLS    150
                     |||||:||||||||||||.:||:||||||||||.|||||||.:|||||||
BPUM_3386___s    101 KGKFPLGMGGEHLVSWPVFRAMHKKYPDLAIIHMDAHTDLREEYEGEPLS    150

BSNT_05732___    151 HSTPIRKAAELIGPHNVYSFGIRSGMKEEFEWAKENGMHISKFEVLEPLK    200
                     |||||||.|.||||.||:|||||||||||||||||.||:|||||||||||
BPUM_3386___s    151 HSTPIRKVAGLIGPENVFSFGIRSGMKEEFEWAKEAGMYISKFEVLEPLK    200

BSNT_05732___    201 EVLPKLAGRPVYVTIDIDVLDPAHAPGTGTVDAGGITSKELLASVHEIAR    250
                     :|||||.|||||||||||||||||||||||||||||||||||||:|.||.
BPUM_3386___s    201 KVLPKLKGRPVYVTIDIDVLDPAHAPGTGTVDAGGITSKELLASIHAIAG    250

BSNT_05732___    251 SEVNVKGADLVEVAPVYDHSEQTANTASKIIREMLLGFVK    290
                     |:|.|.||||||||||||||:||||||||::|||||||||
BPUM_3386___s    251 SDVQVVGADLVEVAPVYDHSDQTANTASKLLREMLLGFVK    290


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