Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05740 and BPUM_3390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_05740___ywhC.1.24716.seq
# -bsequence pep-align/BPUM_3390___ywhC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05740___ywhC-BPUM_3390___ywhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05740___ywhC-BPUM_3390___ywhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05740___ywhC
# 2: BPUM_3390___ywhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 144/221 (65.2%)
# Similarity: 177/221 (80.1%)
# Gaps: 3/221 ( 1.4%)
# Score: 778.0
#
#
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BSNT_05740___ 1 --MDRFLYYPLSLMPYLVITLIVSFTMHELAHAYVAYKFGDDTAKKQGRL 48
:::||.|||.|:||:.|||:|:|||||||||||||:|||.|||.||||
BPUM_3390___y 1 MPLNQFLVYPLELIPYVAITLVVAFTMHELAHAYVAYRFGDPTAKNQGRL 50
BSNT_05740___ 49 TLNPIKHLDPFGTILILVAGFGWARPIPVNRRFFKKPRLAGVLVSIAGPV 98
||||:||||.||||||.|||||||||:||||..||.|||||:.||||||:
BPUM_3390___y 51 TLNPLKHLDVFGTILIFVAGFGWARPVPVNRYHFKNPRLAGICVSIAGPL 100
BSNT_05740___ 99 SNLILAFIGFFLLVLMHAYGMEMLAAFSTGLDQFFSIWIQLNLVLFLFNL 148
|||:|||:|.|:.||:..:|.|.|..|..|:|.||.|:|.||::||||||
BPUM_3390___y 101 SNLVLAFLGCFVYVLLQKFGGESLMRFEPGVDYFFRIFINLNVILFLFNL 150
BSNT_05740___ 149 LPLPPLDGYRIIEDLVPPGVRAKMTQAESYGFIVFLVLFVTPLGSYVLWP 198
||:|||||||||||:|.|.:||||||.|.||.|:||:..:||||.:|..|
BPUM_3390___y 151 LPIPPLDGYRIIEDVVSPHIRAKMTQFEQYGIIIFLIFVITPLGQFVFGP 200
BSNT_05740___ 199 MLNAGRDSILKLFSAIFQPLL 219
::.. ||.|:..|:.|.:|||
BPUM_3390___y 201 LIGM-RDQIIYWFNLILKPLL 220
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