Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05774 and BPUM_3421

See DNA alignment / Visit BSNT_05774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence pep-align/BSNT_05774___ywfC.1.24716.seq
#    -bsequence pep-align/BPUM_3421___bacB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05774___ywfC-BPUM_3421___bacB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05774___ywfC-BPUM_3421___bacB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05774___ywfC
# 2: BPUM_3421___bacB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity:     172/235 (73.2%)
# Similarity:   195/235 (83.0%)
# Gaps:           0/235 ( 0.0%)
# Score: 938.0
# 
#
#=======================================

BSNT_05774___      1 MKTKEDMQELYFPTPKLIEWENGVRQYSTVRGDTEVLMSYVPPHTNVEPH     50
                     |:|::..||.|||..|.|||||||.||||||||||||:|||||||.:|||
BPUM_3421___b      1 MQTEQKTQERYFPQAKKIEWENGVTQYSTVRGDTEVLISYVPPHTIIEPH     50

BSNT_05774___     51 QHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQE    100
                     :|.|.|||:|:.|||.||||...:.:|.|||||||||.|||||.|.||:|
BPUM_3421___b     51 EHPEAQIGIVLKGELQMTVGPSIQLLTPLESAYIAPPFVPHGASNLTDEE    100

BSNT_05774___    101 VIAIDIKRLKADETYTSPEDYFLDIFKTRDLLPGMEVTFFVEDWVEIMLA    150
                     ||||||||||..|.||:|..||||||||||||||||||||||||:|:|:|
BPUM_3421___b    101 VIAIDIKRLKDGEEYTAPPTYFLDIFKTRDLLPGMEVTFFVEDWMELMIA    150

BSNT_05774___    151 KIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPRE    200
                     .||||||||||||||||||||||.||||||:||.|.:|.|||.|||:|:|
BPUM_3421___b    151 NIPGNGGEMPFHKHRNEQIGICISGGYDMTIEGFTEKMAFGTTYFCDPKE    200

BSNT_05774___    201 DHGAINRSEKESKSINIFFPPRYNRAKAKKMKADE    235
                     ||||||...:.|||||:||||||||.|.|:.|..:
BPUM_3421___b    201 DHGAINPKPEASKSINLFFPPRYNRLKPKESKVKK    235


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