Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05790 and BPUM_3428

See DNA alignment / Visit BSNT_05790 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_05790___spsJ.1.24716.seq
#    -bsequence pep-align/BPUM_3428___spsJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05790___spsJ-BPUM_3428___spsJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05790___spsJ-BPUM_3428___spsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05790___spsJ
# 2: BPUM_3428___spsJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     227/321 (70.7%)
# Similarity:   262/321 (81.6%)
# Gaps:           6/321 ( 1.9%)
# Score: 1203.0
# 
#
#=======================================

BSNT_05790___      1 MAKSYLITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMEKLKQ     50
                     |.||||||||||||||.|.||:|:|||.|:||.||||||||||||::|.:
BPUM_3428___s      1 MTKSYLITGGAGFIGLNFVKLLLQETDVRLTVFDKLTYASHPEEMDELLK     50

BSNT_05790___     51 NSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAESHVDRSISQAEPFITT    100
                     .|.|||::|||::|.::|:||||.||.:|||||||||||||..|||||.|
BPUM_3428___s     51 LSHFRFIQGDITLQHELDQAFDEVYDAIIHFAAESHVDRSIESAEPFIQT    100

BSNT_05790___    101 NVMGTYRLAEAVLKGKAKKLIHISTDEVYGDLKADDPAFTETTPLSPNNP    150
                     ||:||||:.|||||||||||||||||||||||:.||.||||.||||||||
BPUM_3428___s    101 NVLGTYRMLEAVLKGKAKKLIHISTDEVYGDLELDDSAFTEQTPLSPNNP    150

BSNT_05790___    151 YSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEKMIPTIIRHAK    200
                     ||||||||||||.||:.||:|||:|||||||||||||.||:||||||.|.
BPUM_3428___s    151 YSASKASSDLLVKSYIHTHQLPAMITRCSNNYGPYQHEEKLIPTIIRKAI    200

BSNT_05790___    201 QGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTN    250
                     .|..:|:||||.||||||:.|||.:|:|.:||.||.|:|||||||||:||
BPUM_3428___s    201 NGEKIPIYGDGQQIRDWLYVEDHAKAVKQVLENGTAGQVYNIGGGNEKTN    250

BSNT_05790___    251 KELASVILKHLG-CEELFAHVEDRKGHDRRYAINASKLKNELGWRQEVTF    299
                     .:|...||..|| ..:..|.|||||||||||||:|||||..|||.|..:|
BPUM_3428___s    251 LDLTKTILTQLGISHDRIAFVEDRKGHDRRYAIDASKLKRGLGWTQLTSF    300

BSNT_05790___    300 EEGIARTIQWY-TDNDR----    315
                     |.||.:||.|| |..|:    
BPUM_3428___s    301 EAGIEKTINWYRTKYDQSEEG    321


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